RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 PDHXO00330 501 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 CALCAP01258 141 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 PON1P27169 355 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 MNDAP41218 407 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC34A1Q06495 639 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 C1QBPQ07021 282 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 OVGP1Q12889 678 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 LCP2Q13094 533 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ALG10Q5BKT4 473 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 HS6ST3Q8IZP7 471 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 SLAIN1Q8ND83 568 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF548Q8NEK5 533 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 NXNL1Q96CM4 212 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 PRDM16Q9HAZ2 1276 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ARMCX1Q9P291 453 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 BORCS7-ASMTA0A0B4J1R7 106 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 TCAPO15273 167 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 MAPK3P27361 379 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 TIGD2Q4W5G0 525 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 SCARA5Q6ZMJ2 495 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 CABP7Q86V35 215 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 MRPL41Q8IXM3 137 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 C3orf20Q8ND61 904 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF473Q8WTR7 871 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 BORCS7Q96B45 105 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 EIF5A2Q9GZV4 153 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 POLR3FQ9H1D9 316 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 LRRC4Q9HBW1 653 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 DYRK4Q9NR20 520 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 LRFN2Q9ULH4 789 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 PCDHA1Q9Y5I3 950 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 PEX16Q9Y5Y5 336 aa7.76□□□□□ -1.17
LIMCH1-201ENST00000313860 BLMP54132 1417 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 A0A087X0B3 334 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 RHPN2P1A8MT19 583 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TNPO2O14787 897 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ZBTB11O95625 1053 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 FGAP02671 866 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 RLN2P04090 185 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ALDH1B1P30837 517 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TDGQ13569 410 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 FGL2Q14314 439 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF630Q2M218 657 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TBCELQ5QJ74 424 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ZBTB49Q6ZSB9 765 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC22A15Q8IZD6 547 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 INO80EQ8NBZ0 244 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 OR2AP1Q8NGE2 309 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC41A3Q96GZ6 507 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CDKN2AIPNLQ96HQ2 116 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF692Q9BU19 519 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SH3BP1Q9Y3L3 701 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 E9PCH4 1651 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ATAD2BQ9ULI0 1458 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MATN2O00339 956 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 UGT2B17O75795 530 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 GNA14O95837 355 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 UCHL3P15374 230 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 DNASE1L1P49184 302 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PRKCDQ05655 676 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 GFPT1Q06210 699 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ALG10BQ5I7T1 473 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 NSMFQ6X4W1 530 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 B3GNT6Q6ZMB0 384 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ELMOD1Q8N336 334 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ANKRD53Q8N9V6 530 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 OR7G2Q8NG99 324 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 OR7A2PQ8NGA2 310 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 OR14K1Q8NGZ2 314 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 NKD1Q969G9 470 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MALSU1Q96EH3 234 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 C11orf24Q96F05 449 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SENP7Q9BQF6 1050 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CLMPQ9H6B4 373 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SUGCTQ9HAC7 445 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SNTG1Q9NSN8 517 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TBC1D13Q9NVG8 400 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 AK5Q9Y6K8 562 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MEIS3P2A8K0S8 358 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PP2D1A8MPX8 630 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SH3BGRLO75368 114 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 GATBO75879 557 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CD58P19256 250 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ARG2P78540 354 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ITGA7Q13683 1181 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 C11orf91Q3C1V1 193 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PAPD7Q5XG87 772 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 EGFLAMQ63HQ2 1017 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 EFL1Q7Z2Z2 1120 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF804AQ7Z570 1209 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 AMIGO1Q86WK6 493 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ERI1Q8IV48 349 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 C11orf65Q8NCR3 313 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 GALNT11Q8NCW6 608 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms