RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ZNF473Q8WTR7 871 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 DEPDC1BQ8WUY9 529 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ARNTL2Q8WYA1 636 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 AGAP3Q96P47 875 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CEP41Q9BYV8 373 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 IL23AQ9NPF7 189 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 BFARQ9NZS9 450 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MPP6Q9NZW5 540 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 GGA2Q9UJY4 613 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 VANGL2Q9ULK5 521 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 YIPF1Q9Y548 306 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 NUP205Q92621 2012 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 C2CD2LO14523 706 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 TYROBPO43914 113 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 KRT37O76014 449 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 ANXA9O76027 345 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 NFKB1P19838 968 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 CNTFP26441 200 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 SERPINB9P50453 376 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 PAPOLAP51003 745 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 YBEYP58557 167 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 HNRNPDQ14103 355 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 MPP2Q14168 576 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 VEPH1Q14D04 833 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 FAM182AQ5T1J6 154 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 TTC39BQ5VTQ0 682 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 CCDC117Q8IWD4 279 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 TCEAL8Q8IYN2 117 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 DENND1AQ8TEH3 1009 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 DYDC1Q8WWB3 177 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 CDKL2Q92772 493 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 MTBPQ96DY7 904 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 ZNF512Q96ME7 567 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 YME1L1Q96TA2 773 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 MLPHQ9BV36 600 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 TMEM106CQ9BVX2 250 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 NOL6Q9H6R4 1146 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 CYP4F11Q9HBI6 524 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 RXFP1Q9HBX9 757 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 MRPL17Q9NRX2 175 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 NDFIP2Q9NV92 336 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 UXTQ9UBK9 157 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 ZNF212Q9UDV6 495 aa10.83□□□□□ -0.68
CLP1-201ENST00000302731 IPO11Q9UI26 975 aaKnown RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 MAGED2Q9UNF1 606 aaPredicted RBP10.83□□□□□ -0.68
CLP1-201ENST00000302731 DOCK4Q8N1I0 1966 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 MYO18AQ92614 2054 aaKnown RBP10.82□□□□□ -0.68
CLP1-201ENST00000302731 CEP350Q5VT06 3117 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 EBAG9O00559 213 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 TM9SF1O15321 606 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 LILRB3O75022 631 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 KRT38O76015 456 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 ZWINTO95229 277 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 POLBP06746 335 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 SNRPAP09012 282 aaKnown RBP10.82□□□□□ -0.68
CLP1-201ENST00000302731 MGAT1P26572 445 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 SLC11A2P49281 568 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 RENBPP51606 427 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 HTRA4P83105 476 aaPredicted RBP10.82□□□□□ -0.68
CLP1-201ENST00000302731 IL9RQ01113 521 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 CDH17Q12864 832 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 DNAJC3Q13217 504 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 PARP15Q460N3 678 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 ARHGAP36Q6ZRI8 547 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 TMEM135Q86UB9 458 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 DNAJC5GQ8N7S2 189 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 PPM1NQ8N819 430 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 MAGEB18Q96M61 343 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 IL22Q9GZX6 179 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 GLOD4Q9HC38 313 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 PCDHB12Q9Y5F1 795 aa10.82□□□□□ -0.68
CLP1-201ENST00000302731 A0A1W2PPM1 405 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 FOXO6A8MYZ6 492 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 F5H5T6 163 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 ACSL4O60488 711 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 USP1O94782 785 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 ASMTLO95671 621 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 PEX11BO96011 259 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 MT-ND3P03897 115 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 KRT4P19013 534 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 TACR2P21452 398 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 DRD4P21917 467 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 ELF1P32519 619 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 CCT5P48643 541 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 HARS2P49590 506 aaKnown RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 GEMP55040 296 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 HNRNPH2P55795 449 aaKnown RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 SESN2P58004 480 aaPredicted RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 SLC18A2Q05940 514 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 NIPAL4Q0D2K0 466 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 PLD1Q13393 1074 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 PPIGQ13427 754 aaKnown RBP eCLIP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms