RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PSMD8P48556 350 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 SLC11A2P49281 568 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 STK19P49842 368 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 METAP1P53582 386 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 C21orf59P57076 290 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ZNF445P59923 1031 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 PITX1P78337 314 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 FKBP3Q00688 224 aaKnown RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 RELBQ01201 579 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 CNGA2Q16280 664 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 HNRNPA1L2Q32P51 320 aaKnown RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 PITRM1Q5JRX3 1037 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 SYPL2Q5VXT5 272 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 USP30Q70CQ3 517 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ARHGEF19Q8IW93 802 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 UNC45BQ8IWX7 931 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 SCML4Q8N228 414 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 STK40Q8N2I9 435 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 AADATQ8N5Z0 425 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 EID2Q8N6I1 236 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 HJURPQ8NCD3 748 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 LMO3Q8TAP4 145 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 DQX1Q8TE96 717 aaKnown RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ELF4Q99607 663 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 OMDQ99983 421 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ACE2Q9BYF1 805 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 FBRSQ9HAH7 460 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 AASDHPPTQ9NRN7 309 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 FTSJ1Q9UET6 329 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 COL5A1P20908 1838 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 C10orf142B7Z368 130 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 SLC16A3O15427 465 aaKnown RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 IRAK2O43187 625 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PAPSS1O43252 624 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 TLX3O43711 291 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 LDOC1O95751 146 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PAEPP09466 180 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 FMO5P49326 533 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 ST8SIA6P61647 398 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PPP2CBP62714 309 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PPP2CAP67775 309 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 MS4A13Q5J8X5 152 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 ZNF658Q5TYW1 1059 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 NUGGCQ68CJ6 796 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 DENND1BQ6P3S1 775 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 TAC4Q86UU9 113 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 CIR1Q86X95 450 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 OR14C36Q8NHC7 312 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PIP4K2CQ8TBX8 421 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 SAP25Q8TEE9 199 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 IRGQQ8WZA9 623 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 PTPRN2Q92932 1015 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 AZIN2Q96A70 460 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 SLC39A13Q96H72 371 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 CNDP2Q96KP4 475 aaKnown RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 TSG101Q99816 390 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
CNOT9-202ENST00000295701 CYTH4Q9UIA0 394 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 KIAA1257Q9ULG3 409 aa9.6□□□□□ -0.87
CNOT9-202ENST00000295701 A0A087WV48 116 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ESPNB1AK53 854 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 RNASEH1O60930 286 aaKnown RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 LUC7L3O95232 432 aaKnown RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ASLP04424 464 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ITGAVP06756 1048 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 JUPP14923 745 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ABCB4P21439 1286 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 TBXAS1P24557 533 aaPredicted RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 CD38P28907 300 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 DRD3P35462 400 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ECT2LQ008S8 904 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 SEMG2Q02383 582 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 PTSQ03393 145 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 TAF5Q15542 800 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 POM121L1PQ3SYA9 428 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 RAP1GAP2Q684P5 730 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 TMPRSS12Q86WS5 348 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 SPATS2Q86XZ4 545 aaKnown RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 FMR1NBQ8N0W7 255 aaPredicted RBP9.59□□□□□ -0.87
CNOT9-202ENST00000295701 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 OR2T34Q8NGX1 318 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 FAM149B1Q96BN6 582 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 SERAC1Q96JX3 654 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 HSFY1Q96LI6 401 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 KREMEN1Q96MU8 473 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 NT5C1BQ96P26 610 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
CNOT9-202ENST00000295701 TJP2Q9UDY2 1190 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms