RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 MLPHQ9BV36 600 aaPredicted RBP15.4■□□□□ 0.06
CCDC116-201ENST00000292779 COLEC11Q9BWP8 271 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 SLC38A7Q9NVC3 462 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 PNPOQ9NVS9 261 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 BFARQ9NZS9 450 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 ZCWPW2A0A1B0GU75 182 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 M0QZ92 97 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 LUC7L3O95232 432 aaKnown RBP15.4■□□□□ 0.06
CCDC116-201ENST00000292779 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
CCDC116-201ENST00000292779 ATP6V1C1P21283 382 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 ARL13BQ3SXY8 428 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 CERCAMQ5T4B2 595 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 MAVSQ7Z434 540 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
CCDC116-201ENST00000292779 TMEM86AQ8N2M4 240 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 CFAP61Q8NHU2 1237 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 DTX3LQ8TDB6 740 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 NRG4Q8WWG1 115 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 DNAJC9Q8WXX5 260 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 PGAP3Q96FM1 320 aaPredicted RBP15.4■□□□□ 0.06
CCDC116-201ENST00000292779 CLPTM1LQ96KA5 538 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 APOL2Q9BQE5 337 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 GBA3Q9H227 469 aa15.4■□□□□ 0.06
CCDC116-201ENST00000292779 CASTOR2A6NHX0 329 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 HHLA1C9JL84 531 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 ATP9BO43861 1147 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 TBX10O75333 385 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 USP1O94782 785 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 RALBP11234 206 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 NFKB1P19838 968 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 GRK2P25098 689 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 SPRP35270 261 aaPredicted RBP15.39■□□□□ 0.05
CCDC116-201ENST00000292779 GCKP35557 465 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 VHLP40337 213 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 MAGEA12P43365 314 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 ABCG1P45844 678 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 LIMK2P53671 638 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 MUM1Q2TAK8 710 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 ANKRD20A4Q4UJ75 823 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 SNX30Q5VWJ9 437 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 BHLHA9Q7RTU4 235 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 SCUBE1Q8IWY4 988 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 PLD6Q8N2A8 252 aaKnown RBP15.39■□□□□ 0.05
CCDC116-201ENST00000292779 PPP4R1Q8TF05 950 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 HDAC11Q96DB2 347 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 MFSD3Q96ES6 412 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 THTPAQ9BU02 230 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 TKTL2Q9H0I9 626 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 WDCPQ9H6R7 721 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 NMRK1Q9NWW6 199 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 OR12D3Q9UGF7 316 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 ADAM28Q9UKQ2 775 aa15.39■□□□□ 0.05
CCDC116-201ENST00000292779 APOBEC2Q9Y235 224 aaKnown RBP15.39■□□□□ 0.05
CCDC116-201ENST00000292779 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 NVLO15381 856 aaKnown RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ZNF189O75820 626 aaPredicted RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 TM7SF2O76062 418 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 AKR1A1P14550 325 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CPA3P15088 417 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 AOC1P19801 751 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 MX2P20592 715 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 SERPINB8P50452 374 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 SCNN1GP51170 649 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 MXRA7P84157 204 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 SLC34A1Q06495 639 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 GALNT2Q10471 571 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ITGA9Q13797 1035 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 TSNAXIP1Q2TAA8 658 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 HSP90AA5PQ58FG0 334 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 RABGAP1LQ5R372 815 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ISL2Q96A47 359 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 STN1Q9H668 368 aaKnown RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 SORCS3Q9UPU3 1222 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 SCN10AQ9Y5Y9 1956 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 EIF4E1BA6NMX2 242 aaKnown RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 MEI4A8MW99 385 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 IDH3AP50213 366 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ABCE1P61221 599 aaKnown RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 BLMHQ13867 455 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CCDC153Q494R4 210 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 DNAL1Q4LDG9 190 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CMPK2Q5EBM0 449 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CXCL17Q6UXB2 119 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ULK2Q8IYT8 1036 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 ZNF333Q96JL9 665 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CAB39LQ9H9S4 337 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CHRAC1Q9NRG0 131 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 UBP1Q9NZI7 540 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 STX18Q9P2W9 335 aaKnown RBP15.38■□□□□ 0.05
CCDC116-201ENST00000292779 TRHDEQ9UKU6 1024 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 CDH9Q9ULB4 789 aa15.38■□□□□ 0.05
CCDC116-201ENST00000292779 TRPV2Q9Y5S1 764 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms