RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPATA2LQ8IUW3 424 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PLD6Q8N2A8 252 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 NAT9Q9BTE0 207 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 SEMA6AQ9H2E6 1030 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 COPS7BQ9H9Q2 264 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PAPOLBQ9NRJ5 636 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 COPG2Q9UBF2 871 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 MID2Q9UJV3 735 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CRYL1Q9Y2S2 319 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 C17orf102A2RUQ5 167 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 MAGEA13PA6NCF6 341 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 E7ESA3 106 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 NRP1O14786 923 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 FAM189A1O60320 539 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 PGK1P00558 417 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 GABRB2P47870 512 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 RBBP5Q15291 538 aaKnown RBP16.21■□□□□ 0.19
SMAD6-201ENST00000288840 SH3D19Q5HYK7 790 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 TMEM110Q86TL2 294 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 PHTF2Q8N3S3 785 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 BLOC1S5Q8TDH9 187 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 ACE2Q9BYF1 805 aaPredicted RBP16.21■□□□□ 0.19
SMAD6-201ENST00000288840 C20orf27Q9GZN8 174 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 SUDS3Q9H7L9 328 aaPredicted RBP16.21■□□□□ 0.19
SMAD6-201ENST00000288840 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
SMAD6-201ENST00000288840 SERPINA6P08185 405 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 STMN1P16949 149 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 EDNRBP24530 442 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 GRIA4P48058 902 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 SLC18A2Q05940 514 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 PPIL2Q13356 520 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 BLMHQ13867 455 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 DENND6AQ8IWF6 608 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 EME1Q96AY2 570 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 QKIQ96PU8 341 aaKnown RBP eCLIP16.21■□□□□ 0.19
SMAD6-201ENST00000288840 SLC4A5Q9BY07 1137 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 PIF1Q9H611 641 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.19
SMAD6-201ENST00000288840 NCF1BA6NI72 391 aaPredicted RBP16.21■□□□□ 0.18
SMAD6-201ENST00000288840 NCF1CA8MVU1 366 aaPredicted RBP16.21■□□□□ 0.18
SMAD6-201ENST00000288840 BTBD19C9JJ37 291 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 KIF3CO14782 793 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 OR4Q2P0C623 313 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 NCF1P14598 390 aaPredicted RBP16.21■□□□□ 0.18
SMAD6-201ENST00000288840 DARSP14868 501 aaKnown RBP16.21■□□□□ 0.18
SMAD6-201ENST00000288840 PAMP19021 973 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 SNX17Q15036 470 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 RPS27LQ71UM5 84 aaKnown RBP16.21■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF410Q86VK4 478 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 C2orf69Q8N8R5 385 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 HSFY1Q96LI6 401 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 CENPKQ9BS16 269 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 DTNAQ9Y4J8 743 aa16.21■□□□□ 0.18
SMAD6-201ENST00000288840 GCATO75600 419 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 ENDOD1O94919 500 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 NMBRP28336 390 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 ANKRD20A4Q4UJ75 823 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 NUP93Q8N1F7 819 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 UBR7Q8N806 425 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 DIS3LQ8TF46 1054 aaKnown RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 LENG8Q96PV6 779 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 CPNE1Q99829 537 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 DUSP16Q9BY84 665 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 Q9H521 79 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 PPME1Q9Y570 386 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 NUMBLQ9Y6R0 609 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 C9JVG2 144 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 PFKMP08237 780 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 FOXD4Q12950 439 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 IGKV6-21A0A0C4DH24 114 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 ABLIM1O14639 778 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 TIMM44O43615 452 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 GFAPP14136 432 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 CNTFP26441 200 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 MPP1Q00013 466 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 SOX4Q06945 474 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 CYLC2Q14093 348 aaPredicted RBP16.2■□□□□ 0.18
SMAD6-201ENST00000288840 GRM3Q14832 879 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 DPYSL2Q16555 572 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 GRTP1Q5TC63 336 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 TRIML2Q8N7C3 387 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 SNX27Q96L92 541 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 ZNF778Q96MU6 729 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 C7orf26Q96N11 449 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 EURLQ9NYK6 297 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 XPR1Q9UBH6 696 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 BCAP29Q9UHQ4 241 aa16.2■□□□□ 0.18
SMAD6-201ENST00000288840 TM7SF2O76062 418 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 ALDOAP04075 364 aaKnown RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PROZP22891 400 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PCSK1P29120 753 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 CLCNKBP51801 687 aa16.19■□□□□ 0.18
SMAD6-201ENST00000288840 TPD52P55327 224 aaPredicted RBP16.19■□□□□ 0.18
SMAD6-201ENST00000288840 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms