RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 MTIF3Q9H2K0 278 aaKnown RBP16.02■□□□□ 0.16
UBR3-201ENST00000272793 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
UBR3-201ENST00000272793 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
UBR3-201ENST00000272793 ALG5Q9Y673 324 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 CYP17A1P05093 508 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 ZBTB6Q15916 424 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 FNBP1LQ5T0N5 605 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 RAD51AP1Q96B01 352 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 RAVER2Q9HCJ3 691 aaKnown RBP16.02■□□□□ 0.16
UBR3-201ENST00000272793 OR1I1O60431 355 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 SCGB1D2O95969 90 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 ACOT2P49753 483 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 TNFAIP8L3Q5GJ75 292 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 PLEKHA1Q9HB21 404 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 DNAJC11Q9NVH1 559 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 MTMR4Q9NYA4 1195 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 NKIRAS2Q9NYR9 191 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 IFT52Q9Y366 437 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 NDUFAF1Q9Y375 327 aa16.02■□□□□ 0.16
UBR3-201ENST00000272793 CES2O00748 559 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 FAM153BP0C7A2 387 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 CXorf57Q6NSI4 855 aaKnown RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 CYP2R1Q6VVX0 501 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 VPS51Q9UID3 782 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 ARHGEF17Q96PE2 2063 aaPredicted RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 RARBP10826 455 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 FDPSP14324 419 aaKnown RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 RPL6Q02878 288 aaKnown RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 EFHC1Q5JVL4 640 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 SLC9A4Q6AI14 798 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 ERMAPQ96PL5 475 aaPredicted RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 SYT15Q9BQS2 421 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 MOCS1Q9NZB8 636 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 L7N2F9 121 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 VAMP2P63027 116 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 AAGABQ6PD74 315 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 C8orf59Q8N0T1 100 aaPredicted RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 ZNF433Q8N7K0 673 aaPredicted RBP16.02■□□□□ 0.15
UBR3-201ENST00000272793 TOP1MTQ969P6 601 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 PLA2G4CQ9UP65 541 aa16.02■□□□□ 0.15
UBR3-201ENST00000272793 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 NUAK1O60285 661 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 GDI2P50395 445 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 AQP5P55064 265 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 TTC27Q6P3X3 843 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 PLCZ1Q86YW0 608 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 SLC22A9Q8IVM8 553 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ADGRG2Q8IZP9 1017 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 UBA3Q8TBC4 463 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBR3-201ENST00000272793 SNRNP200O75643 2136 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 KCNA5P22460 613 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 RFC5P40937 340 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 SLC11A2P49281 568 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 AMHR2Q16671 573 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 GOLGA7BQ2TAP0 167 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZBTB46Q86UZ6 589 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 KYQ8NBH2 561 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ATXN3LQ9H3M9 355 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 VCPKMTQ9H867 229 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 AAR2Q9Y312 384 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 CASKO14936 926 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ALDH4A1P30038 563 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 SLC1A6P48664 564 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 KLK7P49862 253 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 INTS11Q5TA45 600 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 TSEN15Q8WW01 171 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZYG11BQ9C0D3 744 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 OR2AT4A6NND4 320 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 E2F3O00716 465 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 GLP2RO95838 553 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 PPIL6Q8IXY8 311 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 RNF149Q8NC42 400 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZNF540Q8NDQ6 660 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 PARPBPQ9NWS1 579 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 OAS3Q9Y6K5 1087 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 CYB5AP00167 134 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 GALCP54803 685 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 ACOX1Q15067 660 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZIK1Q3SY52 487 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 THAP5Q7Z6K1 395 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 ZNF512BQ96KM6 892 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 ACE2Q9BYF1 805 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 CTSEP14091 401 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 UQCRC1P31930 480 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 RHEBQ15382 184 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 DHFR2Q86XF0 187 aa16.01■□□□□ 0.15
UBR3-201ENST00000272793 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
UBR3-201ENST00000272793 C12orf50Q8NA57 414 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms