RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ALG3Q92685 438 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ACOX2Q99424 681 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 MLPHQ9BV36 600 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 ELOVL6Q9H5J4 265 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 STXBP5LQ9Y2K9 1186 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 TM9SF1O15321 606 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 SLC5A3P53794 718 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 BRMS1LQ5PSV4 323 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 RASAL3Q86YV0 1011 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ST13P4Q8IZP2 240 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 TCP10LQ8TDR4 215 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 IL22Q9GZX6 179 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 COPS7BQ9H9Q2 264 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 PLK2Q9NYY3 685 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 SCN11AQ9UI33 1791 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 STAU1O95793 577 aaKnown RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 GNRH1P01148 92 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 PCNAP12004 261 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ABL2P42684 1182 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 NUDT2P50583 147 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 SPIRE1Q08AE8 756 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 GRB14Q14449 540 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 PCID2Q5JVF3 399 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ZNF618Q5T7W0 954 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 PMF1Q6P1K2 205 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 SLC4A11Q8NBS3 891 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 FAM162AQ96A26 154 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 LRRC39Q96DD0 335 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 PCDH18Q9HCL0 1135 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 RAB21Q9UL25 225 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.17
NPC1-201ENST00000269228 V9GYQ6 96 aa13.96□□□□□ -0.17
NPC1-201ENST00000269228 KRT16P08779 473 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 ADRA1BP35368 520 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 GPR158Q5T848 1215 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 TTC7BQ86TV6 843 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 MED8Q96G25 268 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 OMDQ99983 421 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.18
NPC1-201ENST00000269228 DMAC2Q9NW81 257 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 CFAP97Q9P2B7 532 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.18
NPC1-201ENST00000269228 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 FBXO10Q9UK96 956 aa13.96□□□□□ -0.18
NPC1-201ENST00000269228 PIRTP0C851 137 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 COPAP53621 1224 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 IFI35P80217 286 aaPredicted RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 CDK16Q00536 496 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 STX5Q13190 355 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 LRRC36Q1X8D7 754 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 HGSNATQ68CP4 663 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 PPP4R4Q6NUP7 873 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 SLC22A9Q8IVM8 553 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 APOBEC3GQ9HC16 384 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■□□ 18.6
NPC1-201ENST00000269228 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 FAF1Q9UNN5 650 aaPredicted RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 CRABP2P29373 138 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 CCND3P30281 292 aaPredicted RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 ZNF844Q08AG5 666 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 MFSD4BQ5TF39 518 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 STRADAQ7RTN6 431 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 FBXO39Q8N4B4 442 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 JADE3Q92613 823 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 ECSITQ9BQ95 431 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 FAM50BQ9Y247 325 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 TDRKHQ9Y2W6 561 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 CCL16O15467 120 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 PHGDHO43175 533 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 KATNA1O75449 491 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 RPL17P18621 184 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 CYP2A7P20853 494 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 CCNG1P51959 295 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 PLEKHA7Q6IQ23 1121 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 NAT16Q8N8M0 369 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 OTULINQ96BN8 352 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 PCED1BQ96HM7 432 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 PPP1R16AQ96I34 528 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 SERAC1Q96JX3 654 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
NPC1-201ENST00000269228 CATSPERZQ9NTU4 200 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 FSCN2O14926 492 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 EOMESO95936 686 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 ITGAVP06756 1048 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 VARS2Q5ST30 1063 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 SCARA3Q6AZY7 606 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 LRRC49Q8IUZ0 686 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 AENQ8WTP8 325 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
NPC1-201ENST00000269228 ACBD6Q9BR61 282 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 SNX5Q9Y5X3 404 aa13.95□□□□□ -0.18
NPC1-201ENST00000269228 GNG14A0A1W2PPG7 69 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
NPC1-201ENST00000269228 E9PBE3 544 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms