RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MYOGP15173 224 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 GABRR2P28476 465 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 YBEYP58557 167 aaPredicted RBP16.74■□□□□ 0.27
TPM1-201ENST00000267996 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
TPM1-201ENST00000267996 LONRF1Q17RB8 773 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
TPM1-201ENST00000267996 KCTD11Q693B1 232 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 DENND1CQ8IV53 801 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
TPM1-201ENST00000267996 WBP2Q969T9 261 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 SIGLEC10Q96LC7 697 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 AGAP3Q96P47 875 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 SLC22A12Q96S37 553 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
TPM1-201ENST00000267996 LAMA2P24043 3122 aaKnown RBP16.74■□□□□ 0.27
TPM1-201ENST00000267996 TLDC2A0PJX2 215 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 ARHGAP42A6NI28 874 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 ERI2A8K979 691 aaKnown RBP16.73■□□□□ 0.27
TPM1-201ENST00000267996 GRM6O15303 877 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 AP2A1O95782 977 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
TPM1-201ENST00000267996 GRIA1P42261 906 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 IFNAR2P48551 515 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 GABPB1Q06547 395 aaPredicted RBP16.73■□□□□ 0.27
TPM1-201ENST00000267996 PARP15Q460N3 678 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 ADGRF1Q5T601 910 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 LRRC8BQ6P9F7 803 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 TDRPQ86YL5 185 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 HS6ST3Q8IZP7 471 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 ADAMTS19Q8TE59 1207 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
TPM1-201ENST00000267996 SAMD11Q96NU1 681 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 VPS37BQ9H9H4 285 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 FETUBQ9UGM5 382 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 RSPH14Q9UHP6 348 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 AGO1Q9UL18 857 aaKnown RBP16.73■□□□□ 0.27
TPM1-201ENST00000267996 CHMP2BQ9UQN3 213 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 CHD5Q8TDI0 1954 aa16.73■□□□□ 0.27
TPM1-201ENST00000267996 GRXCR1A8MXD5 290 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 H3BNC9 293 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 RGS16O15492 202 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 GREM1O60565 184 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 SPAG6O75602 509 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 AGTP01019 485 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 PFKLP17858 780 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 HDCP19113 662 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 NFKB1P19838 968 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 SSTR1P30872 391 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 PHBP35232 272 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 IRS1P35568 1242 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 MMP13P45452 471 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 LMAN1P49257 510 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 MTM1Q13496 603 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 RASA2Q15283 850 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 TXNDC8Q6A555 127 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 RFWD3Q6PCD5 774 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 C3orf62Q6ZUJ4 267 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 CIR1Q86X95 450 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 PALM2Q8IXS6 379 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 ELMOD1Q8N336 334 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 ARL14EPQ8N8R7 260 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 MRPS31Q92665 395 aaKnown RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 MLPHQ9BV36 600 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 PPCSQ9HAB8 311 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPM1-201ENST00000267996 RABGEF1Q9UJ41 708 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 NOVA2Q9UNW9 492 aaKnown RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 F5H423 210 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 GFRA2O00451 464 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 LPXNO60711 386 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 RAMP2O60895 175 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 GSTA2P09210 222 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 GCAP28676 217 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 CDC25CP30307 473 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 SLCO1A2P46721 670 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 EPHA5P54756 1037 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 CDH4P55283 916 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 SLC7A9P82251 487 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 SMAD3P84022 425 aaKnown RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 SKOR1P84550 965 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 TNK2Q07912 1038 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 HNRNPDQ14103 355 aaKnown RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 ANO4Q32M45 955 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 PPM1LQ5SGD2 360 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 CHST9Q7L1S5 443 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 SLC22A17Q8WUG5 538 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 PRICKLE1Q96MT3 831 aaPredicted RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 FCRL5Q96RD9 977 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
TPM1-201ENST00000267996 ACSS3Q9H6R3 686 aa16.72■□□□□ 0.27
TPM1-201ENST00000267996 PLAC1Q9HBJ0 212 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms