RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SCARA3Q6AZY7 606 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 C4orf22Q6V702 233 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 UNC5BQ8IZJ1 945 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ATP6V0D2Q8N8Y2 350 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 GOLM1Q8NBJ4 401 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ADAMTS16Q8TE57 1224 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 SHC3Q92529 594 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 PMM1Q92871 262 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 RCN3Q96D15 328 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 UNKQ9C0B0 810 aaKnown RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 RSPH9Q9H1X1 276 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 MKS1Q9NXB0 559 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 TXNDC16Q9P2K2 825 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ANKMY1Q9P2S6 941 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 FETUBQ9UGM5 382 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 SLC8A2Q9UPR5 921 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 TMEM150BA6NC51 233 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 TRIM64BA6NI03 449 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ZSCAN5BA6NJL1 495 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 E7ESA3 106 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 NCAM1P13591 858 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ARSAP15289 507 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 BDNFP23560 247 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 ZNF252P-AS1Q0IIN9 211 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 TMTC4Q5T4D3 741 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 AGAP7PQ5VUJ5 663 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 MAP1SQ66K74 1059 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 TRMT10BQ6PF06 316 aaKnown RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 CCDC81Q6ZN84 652 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 FAM83AQ86UY5 434 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 KATNAL2Q8IYT4 538 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 IL31RAQ8NI17 732 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 CMTM5Q96DZ9 223 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 WDR55Q9H6Y2 383 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 THAP1Q9NVV9 213 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 WRAP73Q9P2S5 460 aaPredicted RBP8.95□□□□□ -0.98
VAPB-201ENST00000265619 KIAA1257Q9ULG3 409 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 SNX13Q9Y5W8 968 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 CSADQ9Y600 493 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 PTPRFP10586 1907 aa8.95□□□□□ -0.98
VAPB-201ENST00000265619 FARP2O94887 1054 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 PRKCGP05129 697 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ADRB2P07550 413 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 CCR10P46092 362 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 RPS6P62753 249 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 BASP1P80723 227 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 AQP6Q13520 282 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 LRIT3Q3SXY7 679 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 TMEM198Q66K66 360 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 KCTD8Q6ZWB6 473 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZNF720Q7Z2F6 126 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 RHOT1Q8IXI2 618 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PPIL6Q8IXY8 311 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 BEND7Q8N7W2 519 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 PDCD6IPQ8WUM4 868 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZNF486Q96H40 463 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 TEPSINQ96N21 525 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 MBOAT7Q96N66 472 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 MTG1Q9BT17 334 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 TDRD1Q9BXT4 1180 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 NOL6Q9H6R4 1146 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZNF358Q9NW07 568 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PCDHB2Q9Y5E7 798 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 IKBKGQ9Y6K9 419 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 F8VP50 259 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 FZD9O00144 591 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 AKAP10O43572 662 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 DDHD2O94830 711 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 FAM13AO94988 1023 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 KRT1P04264 644 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 MCF2P10911 925 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 KRT5P13647 590 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 DDX5P17844 614 aaKnown RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 VAMP7P51809 220 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ESRRGP62508 458 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 SPCS2Q15005 226 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 CCSAPQ6IQ19 270 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 FAM117BQ6P1L5 589 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 CYP2R1Q6VVX0 501 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PIGZQ86VD9 579 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 GRAMD2AQ8IUY3 354 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 C10orf107Q8IVU9 208 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 GMCL1P1Q8NEA9 526 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 BPIFB6Q8NFQ5 453 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZUFSPQ96AP4 578 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 MAGED4Q96JG8 741 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ZNF577Q9BSK1 485 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ANKRD60Q9BZ19 345 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 TRPV6Q9H1D0 765 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PLEKHA5Q9HAU0 1116 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PARVGQ9HBI0 331 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 RIPK3Q9Y572 518 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 PLIN4Q96Q06 1357 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 SAC3D1A6NKF1 404 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 KPNA4O00629 521 aaPredicted RBP8.94□□□□□ -0.98
VAPB-201ENST00000265619 NEMP1O14524 444 aa8.94□□□□□ -0.98
VAPB-201ENST00000265619 ARP10275 920 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms