RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TMEM196Q5HYL7 178 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 CXorf57Q6NSI4 855 aaKnown RBP21.23■□□□□ 0.99
RTCA-201ENST00000260563 TRIM67Q6ZTA4 783 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 NUDT18Q6ZVK8 323 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 BBS12Q6ZW61 710 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 SETD3Q86TU7 594 aaPredicted RBP21.23■□□□□ 0.99
RTCA-201ENST00000260563 PHTF2Q8N3S3 785 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 COL25A1Q9BXS0 654 aaPredicted RBP21.23■□□□□ 0.99
RTCA-201ENST00000260563 MFSD1Q9H3U5 465 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 TBC1D17Q9HA65 648 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 DONSONQ9NYP3 566 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 KIAA1522Q9P206 1035 aaPredicted RBP21.23■□□□□ 0.99
RTCA-201ENST00000260563 ZNF212Q9UDV6 495 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 GGA2Q9UJY4 613 aa21.23■□□□□ 0.99
RTCA-201ENST00000260563 NDRG2Q9UN36 371 aaKnown RBP21.23■□□□□ 0.99
RTCA-201ENST00000260563 NUP205Q92621 2012 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 NYNRINQ9P2P1 1898 aaKnown RBP21.22■□□□□ 0.99
RTCA-201ENST00000260563 KANSL1LA0AUZ9 987 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 PABPC1P11940 636 aaKnown RBP21.22■□□□□ 0.99
RTCA-201ENST00000260563 DRD1P21728 446 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 CD70P32970 193 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 GRIA2P42262 883 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 DYNLT1P63172 113 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 C2orf54Q08AI8 447 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 DPYSQ14117 519 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 FSCBQ5H9T9 825 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 ASTLQ6HA08 431 aaPredicted RBP21.22■□□□□ 0.99
RTCA-201ENST00000260563 AHI1Q8N157 1196 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 PQLC3Q8N755 202 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.22■□□□□ 0.99
RTCA-201ENST00000260563 PRDM16Q9HAZ2 1276 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 LTB4R2Q9NPC1 389 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 RBM12Q9NTZ6 932 aaKnown RBP21.22■□□□□ 0.99
RTCA-201ENST00000260563 TBC1D30Q9Y2I9 924 aa21.22■□□□□ 0.99
RTCA-201ENST00000260563 ATG2BQ96BY7 2078 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 WASH4PA8MWX3 477 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 CCDC188H7C350 402 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 APOL1O14791 398 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 ERCC2P18074 760 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 AMPD1P23109 780 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 MESP2Q0VG99 397 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 UBXN2BQ14CS0 331 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 LRRN4CLQ8ND94 238 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 WFIKKN2Q8TEU8 576 aa21.21■□□□□ 0.99
RTCA-201ENST00000260563 FBRSL1Q9HCM7 1045 aaKnown RBP21.21■□□□□ 0.99
RTCA-201ENST00000260563 MUC22E2RYF6 1773 aaPredicted RBP21.21■□□□□ 0.99
RTCA-201ENST00000260563 TBC1D3BA6NDS4 549 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 STK25O00506 426 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 ZFXP17010 805 aaPredicted RBP21.2■□□□□ 0.98
RTCA-201ENST00000260563 TARSP26639 723 aaKnown RBP21.2■□□□□ 0.98
RTCA-201ENST00000260563 CSKP41240 450 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 SLC12A1Q13621 1099 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 GEN1Q17RS7 908 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 FSTL4Q6MZW2 842 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 PLD5Q8N7P1 536 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 PRELID2Q8N945 189 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 FOXQ1Q9C009 403 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 MUC3BQ9H195 1237 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 NDFIP2Q9NV92 336 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 SHROOM3Q8TF72 1996 aa21.2■□□□□ 0.98
RTCA-201ENST00000260563 EGFP01133 1207 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 TGM2P21980 687 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 ZNF783Q6ZMS7 281 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 TTC13Q8NBP0 860 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 OR52K2Q8NGK3 314 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 LMLNQ96KR4 655 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 NELL2Q99435 816 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 MYO18AQ92614 2054 aaKnown RBP21.19■□□□□ 0.98
RTCA-201ENST00000260563 ILVBLA1L0T0 632 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 TMEM221A6NGB7 291 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 APOC4-APOC2K7ER74 178 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 M0R296 226 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 DCLK1O15075 740 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 RAMP2O60895 175 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 APOC2P02655 101 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 CCINQ13939 588 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 LRRC32Q14392 662 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 DMC1Q14565 340 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 EIF4HQ15056 248 aaKnown RBP21.19■□□□□ 0.98
RTCA-201ENST00000260563 CYP1B1Q16678 543 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 PLEKHG6Q3KR16 790 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 FUT11Q495W5 492 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 PITRM1Q5JRX3 1037 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 RNF219Q5W0B1 726 aaPredicted RBP21.19■□□□□ 0.98
RTCA-201ENST00000260563 NCBP2-AS2Q69YL0 99 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 TMCO3Q6UWJ1 677 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 KIAA0907Q7Z7F0 614 aaPredicted RBP21.19■□□□□ 0.98
RTCA-201ENST00000260563 FLCNQ8NFG4 579 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 C1orf54Q8WWF1 131 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 HAUS1Q96CS2 278 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 HOMER3Q9NSC5 361 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 ETNK2Q9NVF9 386 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 VPS28Q9UK41 221 aa21.19■□□□□ 0.98
RTCA-201ENST00000260563 R3HDM2Q9Y2K5 976 aaKnown RBP21.19■□□□□ 0.98
RTCA-201ENST00000260563 A0A0A0MRY4 1105 aa21.18■□□□□ 0.98
RTCA-201ENST00000260563 PRRT4C9JH25 899 aa21.18■□□□□ 0.98
RTCA-201ENST00000260563 PHF2O75151 1096 aa21.18■□□□□ 0.98
RTCA-201ENST00000260563 MZF1P28698 734 aaPredicted RBP21.18■□□□□ 0.98
RTCA-201ENST00000260563 SERPINB6P35237 376 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms