RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 ERVK-10P10266 1014 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 ILF2Q12905 390 aaKnown RBP16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 ANKRD20A4Q4UJ75 823 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 SPDYAQ5MJ70 313 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 MORN1Q5T089 497 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 N4BP2L1Q5TBK1 243 aaPredicted RBP16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 TTC27Q6P3X3 843 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 TAC4Q86UU9 113 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 CCDC124Q96CT7 223 aaKnown RBP16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 CENPKQ9BS16 269 aa16.1■□□□□ 0.17
TMEM30A-201ENST00000230461 TBL1XO60907 577 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 COL6A1P12109 1028 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CCL5P13501 91 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 L1CAMP32004 1257 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 TMCO4Q5TGY1 634 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CLEC20AQ6ZU45 233 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CCDC185Q8N715 623 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 PTPN18Q99952 460 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CYP4F12Q9HCS2 524 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 ARHGEF4Q9NR80 690 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CTNNAL1Q9UBT7 734 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 NRP1O14786 923 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 BGNP21810 368 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CDC25CP30307 473 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 INCA1Q0VD86 236 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 WWOXQ9NZC7 414 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 PRR23AA6NEV1 266 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 ANGPT2O15123 496 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 H2AFYO75367 372 aaKnown RBP16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 C1orf220Q5T0J3 134 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 FUKQ8N0W3 1084 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 NIPA2Q8N8Q9 360 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 XYLT2Q9H1B5 865 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 ADAMTS10Q9H324 1103 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 VCX3AQ9NNX9 186 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 NCKIPSDQ9NZQ3 722 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 MFSD11O43934 449 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 LRIG2O94898 1065 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 C12orf50Q8NA57 414 aaPredicted RBP16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CLEC4CQ8WTT0 213 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CMTM5Q96DZ9 223 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 CERS2Q96G23 380 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 SHCBP1LQ9BZQ2 653 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 ACSS3Q9H6R3 686 aa16.09■□□□□ 0.17
TMEM30A-201ENST00000230461 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 TRPC5OSA6NMA1 111 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 MAP3K7O43318 606 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 SERPINA4P29622 427 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 SCNN1AP37088 669 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 ABCE1P61221 599 aaKnown RBP16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 MYO1HQ8N1T3 1032 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 TTC30BQ8N4P2 665 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 NCLNQ969V3 563 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 SDCBP2Q9H190 292 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 CASS4Q9NQ75 786 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 RGS18Q9NS28 235 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 STOML1Q9UBI4 398 aa16.08■□□□□ 0.17
TMEM30A-201ENST00000230461 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 BANF1O75531 89 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 POLR2EP19388 210 aaKnown RBP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 CRABP2P29373 138 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 HIC1Q14526 733 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 LPIN1Q14693 890 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 TEX44Q53QW1 395 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 TTMPQ5BVD1 217 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 AGGF1Q8N302 714 aaeCLIP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 SNX31Q8N9S9 440 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 RIC8BQ9NVN3 520 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 HEY2Q9UBP5 337 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 BCLAF3A2AJT9 711 aaKnown RBP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 SYNCRIPO60506 623 aaKnown RBP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 RPL17P18621 184 aaKnown RBP16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 RABGGTBP53611 331 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 MAXP61244 160 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 DNAL1Q4LDG9 190 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 FBXO22Q8NEZ5 403 aa16.08■□□□□ 0.16
TMEM30A-201ENST00000230461 SYCE1LA8MT33 242 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 SPTLC1O15269 473 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 SRLQ86TD4 932 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 PYROXD2Q8N2H3 581 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 ZMAT2Q96NC0 199 aaKnown RBP16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 TM6SF2Q9BZW4 377 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 UNC93B1Q9H1C4 597 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 ADGRA2Q96PE1 1338 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 LOC100653049A0A140TA62 436 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 B2RBV5 119 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 CHUKO15111 745 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 KRT34O76011 436 aa16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 ZNF7P17097 686 aaPredicted RBP16.07■□□□□ 0.16
TMEM30A-201ENST00000230461 HTR7P34969 479 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms