RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 TBC1D3KA0A087X1G2 549 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3FA6NER0 549 aaPredicted RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3LB9A6J9 549 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 TRIM38O00635 465 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 SLC7A4O43246 635 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3HP0C7X1 549 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 RPL34P49207 117 aaKnown RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 STILQ15468 1287 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 AGBL4Q5VU57 503 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 RNF219Q5W0B1 726 aaPredicted RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3GQ6DHY5 549 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3CQ6IPX1 549 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 BEND5Q7L4P6 421 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 TAC4Q86UU9 113 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 CCDC117Q8IWD4 279 aaPredicted RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 TBC1D3Q8IZP1 549 aaPredicted RBP11.94□□□□□ -0.5
FRG1-201ENST00000226798 FRS2Q8WU20 508 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 NAALADL1Q9UQQ1 740 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
FRG1-201ENST00000226798 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 CAPN9O14815 690 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 SIGLEC6O43699 453 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 MAGEC1O60732 1142 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 SDC3O75056 442 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 RTN2O75298 545 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 MOCS2O96007 188 aaPredicted RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 BRD2P25440 801 aaKnown RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 MAT2AP31153 395 aaKnown RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 CXADRP78310 365 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 LRMPQ12912 555 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 COBLL1Q53SF7 1204 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 SYPL2Q5VXT5 272 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 RAP1GAP2Q684P5 730 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.93□□□□□ -0.5
FRG1-201ENST00000226798 LGI2Q8N0V4 545 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 SLC25A45Q8N413 288 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 TMEM145Q8NBT3 493 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 HIC2Q96JB3 615 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 MIS12Q9H081 205 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 GOLPH3LQ9H4A5 285 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 SARDHQ9UL12 918 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 PCDHB1Q9Y5F3 818 aa11.93□□□□□ -0.5
FRG1-201ENST00000226798 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 SART1O43290 800 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 CALCAP01258 141 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 APOEP02649 317 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 TACR2P21452 398 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 PRCPP42785 496 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 PLK1P53350 603 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 E2F1Q01094 437 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 CFHR1Q03591 330 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 SULT2A1Q06520 285 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 CNTN1Q12860 1018 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 EIF4EBP2Q13542 120 aaPredicted RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 CDCP2Q5VXM1 449 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 CXorf57Q6NSI4 855 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 KDM7AQ6ZMT4 941 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 DSG4Q86SJ6 1040 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 CHSY1Q86X52 802 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 ZNF248Q8NDW4 579 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 OR4C6Q8NH72 309 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 KAT5Q92993 513 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 FAM149B1Q96BN6 582 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 LGMNQ99538 433 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 TJP2Q9UDY2 1190 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
FRG1-201ENST00000226798 PCDHB4Q9Y5E5 795 aa11.92□□□□□ -0.5
FRG1-201ENST00000226798 A0A1B0GVM2 712 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 A0A1W2PQ27 194 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 A0A1W2PQ64 194 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 TCAF2A6NFQ2 919 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 CAPN8A6NHC0 703 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 PRAMEF26H0Y7S4 382 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 ALOX15BO15296 676 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 PMM2O15305 246 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 ATP9BO43861 1147 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
FRG1-201ENST00000226798 ZNF202O95125 648 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 MT-CO3P00414 261 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
FRG1-201ENST00000226798 GIMD1P0DJR0 217 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 DGKAP23743 735 aa11.91□□□□□ -0.5
FRG1-201ENST00000226798 NNMTP40261 264 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms