RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ZCCHC7Q8N3Z6 543 aaKnown RBP13.79□□□□□ -0.2
SF3A1-201ENST00000215793 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 KCNMB3Q9NPA1 279 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
SF3A1-201ENST00000215793 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MAGEA10P43363 369 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 GTF2BQ00403 316 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 GRIK3Q13003 919 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 STAG3L4Q8TBR4 150 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PIWIL2Q8TC59 973 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 KLHL25Q9H0H3 589 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 CATP04040 527 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 TYMPP19971 482 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 DGKAP23743 735 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 NOS3P29474 1203 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SERPINA4P29622 427 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 IFNGR2P38484 337 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 NAA20P61599 178 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.29e-7■■■■□ 23
SF3A1-201ENST00000215793 CYP2A13Q16696 494 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 FAM126AQ9BYI3 521 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MAPRE3Q9UPY8 281 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 USP17L7P0C7H9 530 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 TAL1P17542 331 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 BDNFP23560 247 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ZNF143P52747 638 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 EPS8Q12929 822 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SLC9A9Q8IVB4 645 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 QRFPRQ96P65 431 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 NLNQ9BYT8 704 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 OSBPL6Q9BZF3 934 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MYLK2Q9H1R3 596 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 TNFSF13BQ9Y275 285 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PNMA8CA0A1B0GUJ8 204 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 XYLBO75191 536 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 GUCY1B2O75343 617 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 LGALS2P05162 132 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 KLRC2P26717 231 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 TNFRSF8P28908 595 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 GTF2E2P29084 291 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 HPCAL1P37235 193 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 ITGA1P56199 1179 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PAGE2BQ5JRK9 111 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 NEK10Q6ZWH5 1172 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 LRRC49Q8IUZ0 686 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 C2orf49Q9BVC5 232 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SERHL2Q9H4I8 314 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SERHLQ9NQF3 203 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PAPOLBQ9NRJ5 636 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PHGDHO43175 533 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 TBC1D12O60347 775 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 CYP7B1O75881 506 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PROCP04070 461 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PTPN1P18031 435 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 LBPP18428 481 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 XRCC4Q13426 336 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
SF3A1-201ENST00000215793 CKAP2Q8WWK9 683 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 MRIQ9BWK5 157 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 KCND1Q9NSA2 647 aa13.78□□□□□ -0.2
SF3A1-201ENST00000215793 PSMD10O75832 226 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 CBX6O95503 412 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 CYP1A2P05177 515 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 CCDC130P13994 396 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 TNNI3P19429 210 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 GNA13Q14344 377 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 FAM187BQ17R55 369 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 ZCCHC23Q6ZST2 131 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 EPHX4Q8IUS5 362 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 SPATA20Q8TB22 786 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 FAM45AQ8TCE6 357 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 TMEM237Q96Q45 408 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 BBS4Q96RK4 519 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.2
SF3A1-201ENST00000215793 USP20Q9Y2K6 914 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms