RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 AP1B1Q10567 949 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ZNF177Q13360 481 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 C6orf118Q5T5N4 469 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 AFMIDQ63HM1 303 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 HEATR6Q6AI08 1181 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 Q7L0L9 218 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ARHGAP12Q8IWW6 846 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 TP53INP2Q8IXH6 220 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ATPAF2Q8N5M1 289 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 CCDC89Q8N998 374 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 BPIFB1Q8TDL5 484 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 LGMNQ99538 433 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 SLC39A8Q9C0K1 460 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 C10orf88Q9H8K7 445 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 TRPV4Q9HBA0 871 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 REV3LO60673 3130 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 UQCRHLA0A096LP55 91 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 KCNN4O15554 427 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 IFNB1P01574 187 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 UQCRHP07919 91 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 FOSL2P15408 326 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 RBL1P28749 1068 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 PPIDQ08752 370 aaKnown RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 PRKD1Q15139 912 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 ELF2Q15723 593 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 PARP15Q460N3 678 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 MPP7Q5T2T1 576 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 TPGS1Q6ZTW0 290 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 B4GALNT4Q76KP1 1039 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 SETD3Q86TU7 594 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 CCDC117Q8IWD4 279 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 GPR161Q8N6U8 529 aaKnown RBP20.34■□□□□ 0.85
PHGDH-210ENST00000641115 CCHCR1Q8TD31 782 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 E2F7Q96AV8 911 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 TRIM51Q9BSJ1 452 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 ZFP14Q9HCL3 533 aa20.34■□□□□ 0.85
PHGDH-210ENST00000641115 ARHGAP42A6NI28 874 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 H0Y626 953 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 LUC7L3O95232 432 aaKnown RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 PTK6Q13882 451 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 NAA30Q147X3 362 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 POLD3Q15054 466 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 SKIV2LQ15477 1246 aaKnown RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 CCDC85BQ15834 202 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 LRRC49Q8IUZ0 686 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 FAM71DQ8N9W8 422 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 LRRN4Q8WUT4 740 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 BHMTQ93088 406 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 MYADMQ96S97 322 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 ANKZF1Q9H8Y5 726 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 DMGDHQ9UI17 866 aaKnown RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 USP15Q9Y4E8 981 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-210ENST00000641115 WNT6Q9Y6F9 365 aa20.33■□□□□ 0.84
PHGDH-210ENST00000641115 CHD5Q8TDI0 1954 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 RASA4BC9J798 803 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 H3BQ06 376 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-210ENST00000641115 RASA4O43374 803 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 STK10O94804 968 aaKnown RBP20.32■□□□□ 0.84
PHGDH-210ENST00000641115 KRT14P02533 472 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 RHOCP08134 193 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 ACTN2P35609 894 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 IFNAR2P48551 515 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 GDF10P55107 478 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 GUCY2DQ02846 1103 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 ZNF33AQ06730 810 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 CDH18Q13634 790 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 ZNF354CQ86Y25 554 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 CARNMT1Q8N4J0 409 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 HTR3CQ8WXA8 447 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 RUBCNQ92622 972 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 RSPRY1Q96DX4 576 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 EPC1Q9H2F5 836 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 NOL6Q9H6R4 1146 aaKnown RBP20.32■□□□□ 0.84
PHGDH-210ENST00000641115 DUS2Q9NX74 493 aaKnown RBP20.32■□□□□ 0.84
PHGDH-210ENST00000641115 ASIC3Q9UHC3 531 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 TBC1D30Q9Y2I9 924 aa20.32■□□□□ 0.84
PHGDH-210ENST00000641115 KIF26AQ9ULI4 1882 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-210ENST00000641115 HEPACAM2A8MVW5 462 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 MTSS1O43312 755 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 LAMP2P13473 410 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 FCARP24071 287 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 PAPOLAP51003 745 aaKnown RBP20.31■□□□□ 0.84
PHGDH-210ENST00000641115 TIGD7Q6NT04 549 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-210ENST00000641115 MFN1Q8IWA4 741 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 DEFB123Q8N688 67 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 OSCP1Q8WVF1 389 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 SUSD6Q92537 303 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 HMCESQ96FZ2 354 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 LRRC3BQ96PB8 259 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 ERP44Q9BS26 406 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 MAGEH1Q9H213 219 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 UBE2ZQ9H832 354 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-210ENST00000641115 PCDH9Q9HC56 1237 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 SPHK2Q9NRA0 654 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 THG1LQ9NWX6 298 aaKnown RBP20.31■□□□□ 0.84
PHGDH-210ENST00000641115 VAV1P15498 845 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 KCNA5P22460 613 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 CCNCP24863 283 aa20.31■□□□□ 0.84
PHGDH-210ENST00000641115 HOXD9P28356 352 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms