RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GABRB2P47870 512 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 MTA1Q13330 715 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 ZNF234Q14588 700 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 FAM133BQ5BKY9 247 aaKnown RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 SYPL2Q5VXT5 272 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 SLFN11Q7Z7L1 901 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 ZDHHC17Q8IUH5 632 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 SYT12Q8IV01 421 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 AHI1Q8N157 1196 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 KIF18AQ8NI77 898 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 BTBD6Q96KE9 485 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 NAPGQ99747 312 aaPredicted RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 TMEM51Q9NW97 253 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.06□□□□□ -0.32
PNKP-217ENST00000625216 EVLQ9UI08 416 aaPredicted RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 GOLGA6L7A0A1B0GV03 622 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 GOLGA8SH3BPF8 625 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 ENC1O14682 589 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 TBL1XO60907 577 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 TRUB2O95900 331 aaKnown RBP13.05□□□□□ -0.32
PNKP-217ENST00000625216 IGLV3-25P01717 112 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
PNKP-217ENST00000625216 RPL6Q02878 288 aaKnown RBP13.05□□□□□ -0.32
PNKP-217ENST00000625216 MAMLD1Q13495 774 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 EIF4EBP2Q13542 120 aaPredicted RBP13.05□□□□□ -0.32
PNKP-217ENST00000625216 FUT11Q495W5 492 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 TMEM215Q68D42 235 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 C11orf63Q6NUN7 778 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 FAM183BPQ6ZVS7 135 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 RABEPKQ7Z6M1 372 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 TAC4Q86UU9 113 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 ADIPOR2Q86V24 386 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 FRMD1Q8N878 549 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 FIBINQ8TAL6 211 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 PIGKQ92643 395 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 C18orf8Q96DM3 657 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 BTN2A3PQ96KV6 586 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 PRDM16Q9HAZ2 1276 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 ITM2CQ9NQX7 267 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 HYOU1Q9Y4L1 999 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
PNKP-217ENST00000625216 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 CTAGE9A4FU28 777 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 TM4SF5O14894 197 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 HSF2BPO75031 334 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 EPHX1P07099 455 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 DLDP09622 509 aaKnown RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 C7P10643 843 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 POLR2EP19388 210 aaKnown RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 OXTRP30559 389 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 SLC6A4P31645 630 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 PTGER3P43115 390 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 LMAN2Q12907 356 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 MS4A13Q5J8X5 152 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 MBLAC2Q68D91 279 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 NADSYN1Q6IA69 706 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 TMPRSS6Q8IU80 811 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 PRCCQ92733 491 aaPredicted RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 FOXJ1Q92949 421 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 SIPA1Q96FS4 1042 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 MCEEQ96PE7 176 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 TLR10Q9BXR5 811 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 NUSAP1Q9BXS6 441 aaKnown RBP13.04□□□□□ -0.32
PNKP-217ENST00000625216 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
PNKP-217ENST00000625216 SMOC1Q9H4F8 434 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms