RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CHST13Q8NET6 341 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 BHLHE22Q8NFJ8 381 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 SCYL1Q96KG9 808 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 ZMAT2Q96NC0 199 aaKnown RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 OMDQ99983 421 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 GATA5Q9BWX5 397 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 GCOM2Q9BZD3 368 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 TMEM233B4DJY2 109 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 ZNF286BP0CG31 522 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 FGFR3P22607 806 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 PIK3R1P27986 724 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 NAGLUP54802 743 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 LSAMPQ13449 338 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 LRRC8BQ6P9F7 803 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 CTU1Q7Z7A3 348 aaKnown RBP16.12■□□□□ 0.17
NPHP4-211ENST00000622020 DSELQ8IZU8 1212 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 DEFB106AQ8N104 65 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 APBB2Q92870 758 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 TASP1Q9H6P5 420 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 CHRAC1Q9NRG0 131 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 LMCD1Q9NZU5 365 aa16.12■□□□□ 0.17
NPHP4-211ENST00000622020 SCN1AP35498 2009 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 DNAJA2O60884 412 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CSPG5O95196 566 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 C2P06681 752 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CNTFP26441 200 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 SULT1E1P49888 294 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 LSM12Q3MHD2 195 aaKnown RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 NADK2Q4G0N4 442 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 EPGNQ6UW88 154 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 TMEM110Q86TL2 294 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 METTL25Q8N6Q8 603 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 KLRG1Q96E93 195 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 NPAS2Q99743 824 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 SPATC1LQ9H0A9 340 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 IARS2Q9NSE4 1012 aaKnown RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PRMT7Q9NVM4 692 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 SNTG2Q9NY99 539 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 AP4B1Q9Y6B7 739 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 COMMD3-BMI1R4GMX3 469 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PTPRFP10586 1907 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CRTAMO95727 393 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 ATICP31939 592 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 FSCBQ5H9T9 825 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 ADGRG6Q86SQ4 1221 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CCNYL1Q8N7R7 359 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 JADE3Q92613 823 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 KCNN1Q92952 543 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 SLC4A5Q9BY07 1137 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 ZDHHC7Q9NXF8 308 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 KLK14Q9P0G3 267 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 MORF4L1Q9UBU8 362 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PHIPQ8WWQ0 1821 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 G3V2L1 256 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 TFAP2AP05549 437 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 HARS2P49590 506 aaKnown RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 NDUFV1P49821 464 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 LILRA2Q8N149 483 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PNPLA1Q8N8W4 532 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 ACMSDQ8TDX5 336 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 ITFG2Q969R8 447 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 NMRAL1Q9HBL8 299 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 C20orf96Q9NUD7 363 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PCDHB12Q9Y5F1 795 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 HEMK1Q9Y5R4 338 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CDY2AQ9Y6F7 541 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 CDY1Q9Y6F8 540 aa16.11■□□□□ 0.17
NPHP4-211ENST00000622020 PIGNO95427 931 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 SMIM18P0DKX4 95 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
NPHP4-211ENST00000622020 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 GNEQ9Y223 722 aaKnown RBP16.1■□□□□ 0.17
NPHP4-211ENST00000622020 FAM72CH0Y354 149 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 CLDN5O00501 218 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 FBXO21O94952 628 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 AKAP5P24588 427 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 DPP6P42658 865 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 BAG6P46379 1132 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 USP46P62068 366 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 CDKL1Q00532 357 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 CDK18Q07002 472 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 CEACAM7Q14002 265 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 ARL13AQ5H913 290 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-211ENST00000622020 MAP3K21Q5TCX8 1036 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 FAM72AQ5TYM5 149 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 FAM72DQ6L9T8 149 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 FAM72BQ86X60 149 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 PCDH20Q8N6Y1 951 aaKnown RBP16.1■□□□□ 0.17
NPHP4-211ENST00000622020 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms