RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 MFSD11O43934 449 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 LILRB3O75022 631 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 CLASP2O75122 1294 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 CDC25CP30307 473 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 RPL22P35268 128 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 FAM193AP78312 1265 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 TRADDQ15628 312 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 ANO4Q32M45 955 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 RABGAP1LQ5R372 815 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZDHHC24Q6UX98 284 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 DNAJB7Q7Z6W7 309 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 PDIK1LQ8N165 341 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 NSMCE1Q8WV22 266 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 AUTS2Q8WXX7 1259 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 EXOC4Q96A65 974 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 AZIN2Q96A70 460 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 PABPC3Q9H361 631 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 OSER1Q9NX31 292 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 CDH22Q9UJ99 828 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 NUDT5Q9UKK9 219 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 TRHDEQ9UKU6 1024 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 TRIOO75962 3097 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 TYW5A2RUC4 315 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 F5H5T6 163 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 IVLP07476 585 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 RHOQP17081 205 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 IVDP26440 423 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 HOXC13P31276 330 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 HSD17B3P37058 310 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 CDK16Q00536 496 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 SIGLEC14Q08ET2 396 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 PRPSAP1Q14558 356 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 PPM1LQ5SGD2 360 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 IER5LQ5T953 404 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 CHSY1Q86X52 802 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 LEMD2Q8NC56 503 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 KREMEN2Q8NCW0 462 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 PRSS33Q8NF86 280 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 ASIC4Q96FT7 647 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 OLFM3Q96PB7 478 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 NEUROG2Q9H2A3 272 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 RAB6BQ9NRW1 208 aa17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 LSM7Q9UK45 103 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-210ENST00000617904 A0A0A0MRY4 1105 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 WASH4PA8MWX3 477 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 AP3B1O00203 1094 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 PSMD3O43242 534 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 TGM5O43548 720 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 LATS1O95835 1130 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 C8AP07357 584 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 HMBSP08397 361 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 PHBP35232 272 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 NDST2P52849 883 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 PRKD1Q15139 912 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 HIF1AQ16665 826 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 RNASEH2BQ5TBB1 312 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 RHBDF2Q6PJF5 856 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 ATPAF2Q8N5M1 289 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 RTL3Q8N8U3 475 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 SPATA13Q96N96 652 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 USP29Q9HBJ7 922 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 TMPRSS4Q9NRS4 437 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZMYM5Q9UJ78 669 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 PLAAQ9Y263 795 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZNF510Q9Y2H8 683 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 HS3ST4Q9Y661 456 aa17.21■□□□□ 0.35
TRAPPC3-210ENST00000617904 ARHGAP42A6NI28 874 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 FAM72CH0Y354 149 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 XYLBO75191 536 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 IGLV3-27P01718 113 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 MYZAPP0CAP1 466 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 ZSCAN5DPP0CG00 497 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCNCP24863 283 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 MAPKAPK2P49137 400 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 PPIDQ08752 370 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 GALNT2Q10471 571 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 ARHGAP15Q53QZ3 475 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 FAM72AQ5TYM5 149 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 TTC39BQ5VTQ0 682 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 FAM72DQ6L9T8 149 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 FAM72BQ86X60 149 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 CCDC13Q8IYE1 715 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 RPRD1AQ96P16 312 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 RBM15Q96T37 977 aaKnown RBP eCLIP17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 ADAM7Q9H2U9 754 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 POMKQ9H5K3 350 aa17.21■□□□□ 0.34
TRAPPC3-210ENST00000617904 ASAH2Q9NR71 780 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms