RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 EDDM13A0A1B0GTR0 161 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 H0Y8X5 98 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 CAPN9O14815 690 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 PAPSS1O43252 624 aaPredicted RBP19.57■□□□□ 0.72
CDX1-202ENST00000616154 MOCS3O95396 460 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 IGLV3-25P01717 112 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 CTSOP43234 321 aaPredicted RBP19.57■□□□□ 0.72
CDX1-202ENST00000616154 RACK1P63244 317 aaKnown RBP19.57■□□□□ 0.72
CDX1-202ENST00000616154 PDCLQ13371 301 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 IQCB1Q15051 598 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 KLHDC7AQ5VTJ3 777 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 TMPRSS7Q7RTY8 843 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 LGI2Q8N0V4 545 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 WDTC1Q8N5D0 677 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 POPDC2Q9HBU9 364 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 TJP2Q9UDY2 1190 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 ADAMTS1Q9UHI8 967 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 XPO7Q9UIA9 1087 aaKnown RBP19.57■□□□□ 0.72
CDX1-202ENST00000616154 FZD4Q9ULV1 537 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 LHX6Q9UPM6 363 aa19.57■□□□□ 0.72
CDX1-202ENST00000616154 COL5A1P20908 1838 aaPredicted RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 A0A1W2PPC4 97 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 TTC34A8MYJ7 566 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 C10orf142B7Z368 130 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 E5RJQ4 531 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 FOXN3O00409 490 aaPredicted RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 MID1O15344 667 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 DFNA5O60443 496 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 TRUB2O95900 331 aaKnown RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 TACR2P21452 398 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 CLCN1P35523 988 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 GRK6P43250 576 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 ZNF165P49910 485 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 GALCP54803 685 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 PTK2Q05397 1052 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 NCAPHQ15003 741 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 HSP90AA4PQ58FG1 418 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 ZC3H12AQ5D1E8 599 aaKnown RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 KCNT1Q5JUK3 1230 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 RAP1GAP2Q684P5 730 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 ADAT2Q7Z6V5 191 aaKnown RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 CHSY1Q86X52 802 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 GAS2L3Q86XJ1 694 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 MMAAQ8IVH4 418 aaKnown RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 BTN2A3PQ96KV6 586 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 CCDC86Q9H6F5 360 aaKnown RBP19.56■□□□□ 0.72
CDX1-202ENST00000616154 PLCB1Q9NQ66 1216 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 NBEAQ8NFP9 2946 aa19.56■□□□□ 0.72
CDX1-202ENST00000616154 A0A1W2PP55 124 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 FAM47DPA6NHR8 397 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 LRRC72A6NJI9 287 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 KCNK3O14649 394 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 VILLO15195 856 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 TNFSF14O43557 240 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 YWHAZP63104 245 aaKnown RBP19.55■□□□□ 0.72
CDX1-202ENST00000616154 ECT2LQ008S8 904 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 EIF4EBP2Q13542 120 aaPredicted RBP19.55■□□□□ 0.72
CDX1-202ENST00000616154 NCEH1Q6PIU2 408 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 OR2T34Q8NGX1 318 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 SLC6A18Q96N87 628 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 OMDQ99983 421 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 ACE2Q9BYF1 805 aaPredicted RBP19.55■□□□□ 0.72
CDX1-202ENST00000616154 NEUROG2Q9H2A3 272 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 SLCO3A1Q9UIG8 710 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 CEP83Q9Y592 693 aa19.55■□□□□ 0.72
CDX1-202ENST00000616154 RNASEH2AO75792 299 aaKnown RBP19.54■□□□□ 0.72
CDX1-202ENST00000616154 GLI1P08151 1106 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 UCHL3P15374 230 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 SLC8A1P32418 973 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 CDH5P33151 784 aaPredicted RBP19.54■□□□□ 0.72
CDX1-202ENST00000616154 USP8P40818 1118 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 C21orf59P57076 290 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 BPIFB4P59827 614 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 SLC12A1Q13621 1099 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 KRT31Q15323 416 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 INAVAQ3KP66 663 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 RNF219Q5W0B1 726 aaPredicted RBP19.54■□□□□ 0.72
CDX1-202ENST00000616154 APCDD1Q8J025 514 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 CPXM1Q96SM3 734 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 FAM129BQ96TA1 746 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 CBX8Q9HC52 389 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.54■□□□□ 0.72
CDX1-202ENST00000616154 ASNSD1Q9NWL6 643 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 DAAM1Q9Y4D1 1078 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 FHOD1Q9Y613 1164 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 BAHCC1Q9P281 2608 aa19.54■□□□□ 0.72
CDX1-202ENST00000616154 A0A1B0GTQ1 180 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 KCNU1A8MYU2 1149 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 F5H5T6 163 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 ADH1BP00325 375 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 C5AR1P21730 350 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 PSMD8P48556 350 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 CCR5P51681 352 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 PITX1P78337 314 aaPredicted RBP19.53■□□□□ 0.72
CDX1-202ENST00000616154 MYL5Q02045 173 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 DRAP1Q14919 205 aaPredicted RBP19.53■□□□□ 0.72
CDX1-202ENST00000616154 TTC39BQ5VTQ0 682 aaPredicted RBP19.53■□□□□ 0.72
CDX1-202ENST00000616154 SLC47A2Q86VL8 602 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 GALNT15Q8N3T1 639 aa19.53■□□□□ 0.72
CDX1-202ENST00000616154 AADATQ8N5Z0 425 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms