RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SMOQ99835 787 aa16.9■□□□□ 0.3
CNOT3-208ENST00000613073 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
CNOT3-208ENST00000613073 KCNK13Q9HB14 408 aa16.9■□□□□ 0.3
CNOT3-208ENST00000613073 BCLAF3A2AJT9 711 aaKnown RBP16.89■□□□□ 0.3
CNOT3-208ENST00000613073 YJEFN3A6XGL0 299 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 USP17L7P0C7H9 530 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 PABPC4LP0CB38 370 aaKnown RBP16.89■□□□□ 0.3
CNOT3-208ENST00000613073 YWHAGP61981 247 aaKnown RBP eCLIP16.89■□□□□ 0.3
CNOT3-208ENST00000613073 DLG1Q12959 904 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 NCBP2-AS2Q69YL0 99 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 FAM35AQ86V20 835 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 SLC7A8Q9UHI5 535 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 FZD10Q9ULW2 581 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 NOD1Q9Y239 953 aa16.89■□□□□ 0.3
CNOT3-208ENST00000613073 MYO18AQ92614 2054 aaKnown RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 A0A0J9YVX5 310 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 KBTBD13C9JR72 458 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 METTL18O95568 372 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 BGNP21810 368 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ARL4AP40617 200 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 BRCC3P46736 316 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 MED21Q13503 144 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 UPP1Q16831 310 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 STKLD1Q8NE28 680 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 SLC7A14Q8TBB6 771 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 PAFAH2Q99487 392 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 LGMNQ99538 433 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ADAM2Q99965 735 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 PIGVQ9NUD9 493 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 DTLQ9NZJ0 730 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 PSMC3IPQ9P2W1 217 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 DAB1O75553 588 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 TMCC1O94876 653 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 FUT4P22083 530 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 CRABP2P29373 138 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 NOS2P35228 1153 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 LHX1P48742 406 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 AQP4P55087 323 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 EFHC2Q5JST6 749 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 SPDYAQ5MJ70 313 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 C6orf163Q5TEZ5 329 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ULK2Q8IYT8 1036 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ARHGAP24Q8N264 748 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ZMIZ2Q8NF64 920 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 OR6Y1Q8NGX8 325 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 CEP70Q8NHQ1 597 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 CFAP36Q96G28 342 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 OXNAD1Q96HP4 312 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 SUDS3Q9H7L9 328 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
CNOT3-208ENST00000613073 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 MARCOQ9UEW3 520 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 F8W810 466 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 SUPT3HO75486 399 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 HPCAP84074 193 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 DUS1LQ6P1R4 473 aaKnown RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 MTBPQ96DY7 904 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 CEP41Q9BYV8 373 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 POPDC2Q9HBU9 364 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 CHADO15335 359 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 FYNP06241 537 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 KITP10721 976 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 LPIN1Q14693 890 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 RBM44Q6ZP01 1051 aaKnown RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 CDKL3Q8IVW4 592 aaPredicted RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 KCTD13Q8WZ19 329 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 RTP4Q96DX8 246 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 NPY6RQ99463 290 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 TRIM56Q9BRZ2 755 aaKnown RBP16.88■□□□□ 0.29
CNOT3-208ENST00000613073 ACSS3Q9H6R3 686 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 TEX264Q9Y6I9 313 aa16.88■□□□□ 0.29
CNOT3-208ENST00000613073 TMEM88BA6NKF7 163 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 NCAM1P13591 858 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 HEATR6Q6AI08 1181 aaKnown RBP16.87■□□□□ 0.29
CNOT3-208ENST00000613073 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 EDEM1Q92611 657 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 TUBB6Q9BUF5 446 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 STAP1Q9ULZ2 295 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 USP3Q9Y6I4 520 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 TCRBV9S1A1TA0A576 114 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 ARHGAP42A6NI28 874 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 MFSD11O43934 449 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 AOC2O75106 756 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 AMHP03971 560 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 ZFXP17010 805 aaPredicted RBP16.87■□□□□ 0.29
CNOT3-208ENST00000613073 BTKQ06187 659 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 TP53INP2Q8IXH6 220 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF276Q8N554 614 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 ZNF398Q8TD17 642 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 RNF139Q8WU17 664 aa16.87■□□□□ 0.29
CNOT3-208ENST00000613073 CCDC124Q96CT7 223 aaKnown RBP16.87■□□□□ 0.29
CNOT3-208ENST00000613073 FAM111AQ96PZ2 611 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms