RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ARTNQ5T4W7 220 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PIK3R6Q5UE93 754 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 ANKRD22Q5VYY1 191 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 NUGGCQ68CJ6 796 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PPP1R21Q6ZMI0 780 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 CENPUQ71F23 418 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 DNAJB7Q7Z6W7 309 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 ITIH5Q86UX2 942 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 TAB3Q8N5C8 712 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 CCDC33Q8N5R6 958 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 NPWQ8N729 165 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PRR7Q8TB68 274 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 CCDC110Q8TBZ0 833 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PSMG2Q969U7 264 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 P2RY11Q96G91 374 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PWWP2AQ96N64 755 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 FRMD8Q9BZ67 464 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 DONSONQ9NYP3 566 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 PPARGC1AQ9UBK2 798 aaKnown RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 UXTQ9UBK9 157 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 XPO7Q9UIA9 1087 aaKnown RBP9.16□□□□□ -0.94
CCDC47-207ENST00000612558 ASB3Q9Y575 518 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 INSL5Q9Y5Q6 135 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 IRAK3Q9Y616 596 aa9.16□□□□□ -0.94
CCDC47-207ENST00000612558 A0A0A0MRY4 1105 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 LCHNA4D1U4 455 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 WASH4PA8MWX3 477 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ALOX15BO15296 676 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 TGM5O43548 720 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 OPHN1O60890 802 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ADH1AP07327 375 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 MYZAPP0CAP1 466 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 CTNNB1P35222 781 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 GARSP41250 739 aaKnown RBP9.15□□□□□ -0.95
CCDC47-207ENST00000612558 MAGEA4P43358 317 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ARL4CP56559 192 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 COG7P83436 770 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.95
CCDC47-207ENST00000612558 KYNUQ16719 465 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 PABPC1LQ4VXU2 614 aaKnown RBP9.15□□□□□ -0.95
CCDC47-207ENST00000612558 MS4A13Q5J8X5 152 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 LILRA6Q6PI73 481 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC31Q6UY01 552 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ARHGEF18Q6ZSZ5 1173 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 C14orf80Q86SX3 495 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 CROCCP2Q86T23 111 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 TP53INP2Q8IXH6 220 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ZNF683Q8IZ20 524 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 PDIK1LQ8N165 341 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 NETO2Q8NC67 525 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 OR2W6PQ8NHA6 318 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 SPATA13Q96N96 652 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 TTC25Q96NG3 672 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 KLHL5Q96PQ7 755 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 EMILIN2Q9BXX0 1053 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 NACA2Q9H009 215 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 SAYSD1Q9NPB0 183 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 DNAJC17Q9NVM6 304 aaKnown RBP9.15□□□□□ -0.95
CCDC47-207ENST00000612558 NINJ2Q9NZG7 142 aa9.15□□□□□ -0.95
CCDC47-207ENST00000612558 ZMYND8Q9ULU4 1186 aaPredicted RBP9.15□□□□□ -0.95
CCDC47-207ENST00000612558 DOCK4Q8N1I0 1966 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 IGLV3-10A0A075B6K4 115 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TCRBV7S3A2A0A539 114 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 GOLGA8MH3BSY2 632 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 RNF103O00237 685 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 POLR3GO15318 223 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 COCHO43405 550 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TMEM63AO94886 807 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 METTL18O95568 372 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ACSL3O95573 720 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 HMBSP08397 361 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 SPATA31D3P0C874 917 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 RHOQP17081 205 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TPSB2P20231 275 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 FDFT1P37268 417 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 UBE3AQ05086 875 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 WASHC5Q12768 1159 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 PDIA2Q13087 525 aaKnown RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 CBLBQ13191 982 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TPSAB1Q15661 275 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 PARP6Q2NL67 630 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 SPATA31D4Q6ZUB0 917 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 CCDC149Q6ZUS6 474 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 LRRC49Q8IUZ0 686 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 RTL3Q8N8U3 475 aaKnown RBP9.14□□□□□ -0.95
CCDC47-207ENST00000612558 MCUQ8NE86 351 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ARL8AQ96BM9 186 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 PLD4Q96BZ4 506 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TSGA13Q96PP4 275 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 VAT1Q99536 393 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TCF25Q9BQ70 676 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 TMEM109Q9BVC6 243 aa9.14□□□□□ -0.95
CCDC47-207ENST00000612558 ROPN1BQ9BZX4 212 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms