RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CCDC114Q96M63 670 aa11.43□□□□□ -0.58
CTCFL-214ENST00000608108 KLC2Q9H0B6 622 aa11.43□□□□□ -0.58
CTCFL-214ENST00000608108 THG1LQ9NWX6 298 aaKnown RBP11.43□□□□□ -0.58
CTCFL-214ENST00000608108 PLK2Q9NYY3 685 aa11.43□□□□□ -0.58
CTCFL-214ENST00000608108 RAD54BQ9Y620 910 aa11.43□□□□□ -0.58
CTCFL-214ENST00000608108 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NEDD8-MDP1E9PL57 170 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 H0Y626 953 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 H7C0C1 242 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 DFFAO00273 331 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 PPP1R12AO14974 1030 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NCAM2O15394 837 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 RAMP2O60895 175 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 RBP3P10745 1247 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MX2P20592 715 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 HOXD9P28356 352 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 COILP38432 576 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ATP5OP48047 213 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 KCNJ1P48048 391 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 FCHO2Q0JRZ9 810 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 GALNT2Q10471 571 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ZNF177Q13360 481 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 XRCC4Q13426 336 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CDH18Q13634 790 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 GRM2Q14416 872 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ANO4Q32M45 955 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 EML3Q32P44 896 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 C6orf118Q5T5N4 469 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 FYB2Q5VWT5 728 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 AFMIDQ63HM1 303 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TRIM68Q6AZZ1 485 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 DRICH1Q6PGQ1 229 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MFN1Q8IWA4 741 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MFSD6LQ8IWD5 586 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ARHGAP12Q8IWW6 846 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CCDC105Q8IYK2 499 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ADGRG2Q8IZP9 1017 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CARNMT1Q8N4J0 409 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 IRF7Q92985 503 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NKD2Q969F2 451 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 BBS2Q9BXC9 721 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 SPHK2Q9NRA0 654 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MYO10Q9HD67 2058 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MIA3Q5JRA6 1907 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ECI2O75521 394 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 LUC7L3O95232 432 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NFATC1O95644 943 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 PENKP01210 267 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ITGAVP06756 1048 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 RHOCP08134 193 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 PSMC3P17980 439 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 GARSP41250 739 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NDST2P52849 883 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 LEXMQ3ZCV2 418 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TEX35Q5T0J7 233 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 C8orf74Q6P047 294 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 B4GALNT4Q76KP1 1039 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 SETD3Q86TU7 594 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TMEM25Q86YD3 366 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CDKL3Q8IVW4 592 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CCDC117Q8IWD4 279 aaPredicted RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 YAF2Q8IY57 180 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MMGT1Q8N4V1 131 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ATPAF2Q8N5M1 289 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 CCNYQ8ND76 341 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 DEPDC1BQ8WUY9 529 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ATP2A3Q93084 1043 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 QKIQ96PU8 341 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 LGMNQ99538 433 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 FAM83CQ9BQN1 747 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TMEM121Q9BTD3 319 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 PLA2G2FQ9BZM2 168 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 SLC39A8Q9C0K1 460 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 EBF3Q9H4W6 596 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 NOL6Q9H6R4 1146 aaKnown RBP11.42□□□□□ -0.58
CTCFL-214ENST00000608108 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 MARK1Q9P0L2 795 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 AMACRQ9UHK6 382 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 ZNF148Q9UQR1 794 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 TBC1D30Q9Y2I9 924 aa11.42□□□□□ -0.58
CTCFL-214ENST00000608108 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 EFCAB8A8MWE9 144 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 C2CD4DB7Z1M9 353 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 RASA4BC9J798 803 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 RASA4O43374 803 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 ECEL1O95672 775 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 ADH1CP00326 375 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 CYP17A1P05093 508 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 TYRP14679 529 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 ARSAP15289 507 aa11.41□□□□□ -0.58
CTCFL-214ENST00000608108 MRPS25P82663 173 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms