RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	P2RY2	P41231	377 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	COPA	P53621	1224 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	CAMK2G	Q13555	558 aa	Predicted RBP	27.58	■■■□□ 2.01
USF2-215	ENST00000602164	SLC18A3	Q16572	532 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	MAP7D1	Q3KQU3	841 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	PRR23B	Q6ZRT6	265 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	TFAP2D	Q7Z6R9	452 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	SLFN11	Q7Z7L1	901 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	CNGA4	Q8IV77	575 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	ZNF366	Q8N895	744 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	KDM1B	Q8NB78	822 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	ARHGEF26	Q96DR7	871 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	CHP1	Q99653	195 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	ZYG11B	Q9C0D3	744 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	MKRN2	Q9H000	416 aa	Known RBP	27.58	■■■□□ 2.01
USF2-215	ENST00000602164	MRPL47	Q9HD33	250 aa	Known RBP	27.58	■■■□□ 2.01
USF2-215	ENST00000602164	FZD10	Q9ULW2	581 aa		27.58	■■■□□ 2.01
USF2-215	ENST00000602164	AKR1B15	C9JRZ8	316 aa	Predicted RBP	27.57	■■■□□ 2
USF2-215	ENST00000602164	LRIG2	O94898	1065 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	C7	P10643	843 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	NUMB	P49757	651 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	ECT2L	Q008S8	904 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	LPAL2	Q16609	132 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	USP39	Q53GS9	565 aa	Known RBP	27.57	■■■□□ 2
USF2-215	ENST00000602164	SCYL2	Q6P3W7	929 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	27.57	■■■□□ 2
USF2-215	ENST00000602164	CEP68	Q76N32	757 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	SETD3	Q86TU7	594 aa	Predicted RBP	27.57	■■■□□ 2
USF2-215	ENST00000602164	KBTBD6	Q86V97	674 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	PYROXD2	Q8N2H3	581 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	ZNHIT6	Q9NWK9	470 aa	Known RBP	27.57	■■■□□ 2
USF2-215	ENST00000602164	INVS	Q9Y283	1065 aa		27.57	■■■□□ 2
USF2-215	ENST00000602164	SRPRA	P08240	638 aa	Known RBP	27.56	■■■□□ 2
USF2-215	ENST00000602164	GALC	P54803	685 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	AIF1	P55008	147 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	SEMA3B	Q13214	749 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	RNF219	Q5W0B1	726 aa	Predicted RBP	27.56	■■■□□ 2
USF2-215	ENST00000602164	NLRP14	Q86W24	1093 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	FAM160A2	Q8N612	972 aa	Predicted RBP	27.56	■■■□□ 2
USF2-215	ENST00000602164	TC2N	Q8N9U0	490 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	RLN3	Q8WXF3	142 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	ZC3H10	Q96K80	434 aa	Known RBP	27.56	■■■□□ 2
USF2-215	ENST00000602164	PEBP4	Q96S96	227 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	PSMB7	Q99436	277 aa		27.56	■■■□□ 2
USF2-215	ENST00000602164	RIF1	Q5UIP0	2472 aa	Known RBP	27.56	■■■□□ 2
USF2-215	ENST00000602164	SPAG17	Q6Q759	2223 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	SYNCRIP	O60506	623 aa	Known RBP	27.55	■■■□□ 2
USF2-215	ENST00000602164	RHOC	P08134	193 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	BCKDHB	P21953	392 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	L1CAM	P32004	1257 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	STK19	P49842	368 aa	Predicted RBP	27.55	■■■□□ 2
USF2-215	ENST00000602164	PLK5	Q496M5	336 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	EFHC2	Q5JST6	749 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	LAIR1	Q6GTX8	287 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	PGBD3	Q8N328	593 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	FRMD1	Q8N878	549 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	PACSIN1	Q9BY11	444 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	MTG2	Q9H4K7	406 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	PRSS16	Q9NQE7	514 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	SLCO3A1	Q9UIG8	710 aa		27.55	■■■□□ 2
USF2-215	ENST00000602164	FRYL	O94915	3013 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	LRCH4	O75427	683 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	DES	P17661	470 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	VASP	P50552	380 aa	Predicted RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	SULT2A1	Q06520	285 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	TSR1	Q2NL82	804 aa	Known RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	HNRNPA1L2	Q32P51	320 aa	Known RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	OR2T3	Q8NH03	318 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	TBC1D31	Q96DN5	1066 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	RPL10L	Q96L21	214 aa	Known RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	NUP85	Q9BW27	656 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	DUSP15	Q9H1R2	295 aa	Predicted RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	CD93	Q9NPY3	652 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	MBD1	Q9UIS9	605 aa	Predicted RBP	27.54	■■■□□ 2
USF2-215	ENST00000602164	VPS28	Q9UK41	221 aa		27.54	■■■□□ 2
USF2-215	ENST00000602164	FAM186A	A6NE01	2351 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	NYNRIN	Q9P2P1	1898 aa	Known RBP	27.53	■■■□□ 2
USF2-215	ENST00000602164	WDR87	Q6ZQQ6	2873 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164		A0A0D9SEW6	157 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	TTC34	A8MYJ7	566 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	RHOQ	P17081	205 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	OR1E1	P30953	314 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	ST8SIA6	P61647	398 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	C6orf118	Q5T5N4	469 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	METTL3	Q86U44	580 aa	Known RBP	27.53	■■■□□ 2
USF2-215	ENST00000602164	RUBCN	Q92622	972 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	PPP1R9B	Q96SB3	815 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	RETREG1	Q9H6L5	497 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	27.53	■■■□□ 2
USF2-215	ENST00000602164	NDFIP2	Q9NV92	336 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	TMEM248	Q9NWD8	314 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	GPATCH2L	Q9NWQ4	482 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	RAB23	Q9ULC3	237 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	GVINP1	Q7Z2Y8	2422 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	CHD5	Q8TDI0	1954 aa		27.53	■■■□□ 2
USF2-215	ENST00000602164	ILVBL	A1L0T0	632 aa		27.52	■■■□□ 2
USF2-215	ENST00000602164	MIP	P30301	263 aa		27.52	■■■□□ 2
USF2-215	ENST00000602164	CA9	Q16790	459 aa		27.52	■■■□□ 2
USF2-215	ENST00000602164	DAB2IP	Q5VWQ8	1189 aa		27.52	■■■□□ 2
USF2-215	ENST00000602164	ZNF783	Q6ZMS7	281 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms