RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 KBTBD6Q86V97 674 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 FAM160A2Q8N612 972 aaPredicted RBP17.33■□□□□ 0.36
TRIM28-215ENST00000601150 KDM1BQ8NB78 822 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 FNIP1Q8TF40 1166 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 ZC3H10Q96K80 434 aaKnown RBP17.33■□□□□ 0.36
TRIM28-215ENST00000601150 MRGPRX3Q96LB0 322 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 FEM1AQ9BSK4 669 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 PRDM16Q9HAZ2 1276 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 ABHD10Q9NUJ1 306 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 SUN2Q9UH99 717 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 GMEB2Q9UKD1 530 aa17.33■□□□□ 0.36
TRIM28-215ENST00000601150 RNF8O76064 485 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 OR1E1P30953 314 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 CTSOP43234 321 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 TBX2Q13207 712 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 ELF2Q15723 593 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 C6orf118Q5T5N4 469 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 MANEALQ5VSG8 457 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 KIAA1324Q6UXG2 1013 aaKnown RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 TFAP2DQ7Z6R9 452 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 SETD3Q86TU7 594 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-215ENST00000601150 GAS2L3Q86XJ1 694 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF366Q8N895 744 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 RLN3Q8WXF3 142 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 ALG14Q96F25 216 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 MYO19Q96H55 970 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 TRIM7Q9C029 511 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 THAP2Q9H0W7 228 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 MUC3BQ9H195 1237 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 SLC6A17Q9H1V8 727 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 DEF6Q9H4E7 631 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 FBRSQ9HAH7 460 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 VPS28Q9UK41 221 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 OR51B4Q9Y5P0 310 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
TRIM28-215ENST00000601150 SSU72P8A0A1W2PR75 194 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 AKR1B15C9JRZ8 316 aaPredicted RBP17.31■□□□□ 0.36
TRIM28-215ENST00000601150 FAM72CH0Y354 149 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF217O75362 1048 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 RHOBTB1O94844 696 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 RETP07949 1114 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 NNMTP40261 264 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF252P-AS1Q0IIN9 211 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 MAP7D1Q3KQU3 841 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 PLK5Q496M5 336 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 FAM72AQ5TYM5 149 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 FAM72DQ6L9T8 149 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 RWDD4Q6NW29 188 aaKnown RBP17.31■□□□□ 0.36
TRIM28-215ENST00000601150 FAM72BQ86X60 149 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 TMPRSS6Q8IU80 811 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 TBC1D31Q96DN5 1066 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 LOXL4Q96JB6 756 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 NCAPGQ9BPX3 1015 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 MKRN2Q9H000 416 aaKnown RBP17.31■□□□□ 0.36
TRIM28-215ENST00000601150 DUSP15Q9H1R2 295 aaPredicted RBP17.31■□□□□ 0.36
TRIM28-215ENST00000601150 RETREG1Q9H6L5 497 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 PRSS16Q9NQE7 514 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 FZD10Q9ULW2 581 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 NENFQ9UMX5 172 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 CHD5Q8TDI0 1954 aa17.31■□□□□ 0.36
TRIM28-215ENST00000601150 ABCA7Q8IZY2 2146 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 FAM186AA6NE01 2351 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 MAP3K13O43283 966 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 LRIG2O94898 1065 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 CYP1A2P05177 515 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 RHOQP17081 205 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 BCKDHBP21953 392 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 L1CAMP32004 1257 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 NUMBP49757 651 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF75DP51815 510 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 COPAP53621 1224 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 GALCP54803 685 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 KRT83P78385 493 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 HNRNPA1L2Q32P51 320 aaKnown RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF783Q6ZMS7 281 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 METTL3Q86U44 580 aaKnown RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 DCLK2Q8N568 766 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 SIPA1Q96FS4 1042 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 ZNF212Q9UDV6 495 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 SLC25A13Q9UJS0 675 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 RIF1Q5UIP0 2472 aaKnown RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 TNRC6BQ9UPQ9 1833 aaKnown RBP17.3■□□□□ 0.36
TRIM28-215ENST00000601150 MYO15AQ9UKN7 3530 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 NUP205Q92621 2012 aa17.3■□□□□ 0.36
TRIM28-215ENST00000601150 ILVBLA1L0T0 632 aa17.29■□□□□ 0.36
TRIM28-215ENST00000601150 TTC34A8MYJ7 566 aa17.29■□□□□ 0.36
TRIM28-215ENST00000601150 AKR1B10O60218 316 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms