RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MIS12Q9H081 205 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 ARHGAP20Q9P2F6 1191 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 NAALADL1Q9UQQ1 740 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 AK5Q9Y6K8 562 aa10.31□□□□□ -0.76
LIG1-209ENST00000596104 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
LIG1-209ENST00000596104 TMEM131Q92545 1883 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 PMM2O15305 246 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 MOCS2O96007 188 aaPredicted RBP10.3□□□□□ -0.76
LIG1-209ENST00000596104 VAV1P15498 845 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 CKMT2P17540 419 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 FMO5P49326 533 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 STILQ15468 1287 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 SYPL2Q5VXT5 272 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 LRRC69Q6ZNQ3 347 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 BEND5Q7L4P6 421 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 LGI2Q8N0V4 545 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 LSM14AQ8ND56 463 aaKnown RBP10.3□□□□□ -0.76
LIG1-209ENST00000596104 LMO3Q8TAP4 145 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 FRS2Q8WU20 508 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 ARMCX3Q9UH62 379 aaPredicted RBP10.3□□□□□ -0.76
LIG1-209ENST00000596104 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 PCDHB4Q9Y5E5 795 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
LIG1-209ENST00000596104 BPTFQ12830 3046 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3DA0A087WVF3 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3IA0A087WXS9 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3KA0A087X1G2 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TRIM49BA6NDI0 452 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3FA6NER0 549 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3LB9A6J9 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TRIM38O00635 465 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 RRP8O43159 456 aaKnown RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 SLC7A4O43246 635 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 SART1O43290 800 aaKnown RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 KALRNO60229 2985 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 BRINP1O60477 761 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 MOCS3O95396 460 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 IL1BP01584 269 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 IGLV3-25P01717 112 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TACR2P21452 398 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 ACP1P24666 158 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 GPD2P43304 727 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 TLE3Q04726 772 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 OVGP1Q12889 678 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 PNOCQ13519 176 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 EIF4EBP2Q13542 120 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 SLC12A1Q13621 1099 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 SLC45A4Q5BKX6 768 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 ZNF658Q5TYW1 1059 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 RNF219Q5W0B1 726 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 RAP1GAP2Q684P5 730 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3GQ6DHY5 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 PCSK4Q6UW60 755 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 PRPF39Q86UA1 669 aaKnown RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 IQCHQ86VS3 1027 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 CHSY1Q86X52 802 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 CCDC117Q8IWD4 279 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D3Q8IZP1 549 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 DCBLD1Q8N8Z6 715 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 BAP1Q92560 729 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 FGF11Q92914 225 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 FAM149B1Q96BN6 582 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 NT5C1BQ96P26 610 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 SPAG5Q96R06 1193 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 TSG101Q99816 390 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 PRMT1Q99873 361 aaKnown RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 KDM4CQ9H3R0 1056 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 SARDHQ9UL12 918 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 DMTF1Q9Y222 760 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 CEP83Q9Y592 693 aa10.29□□□□□ -0.76
LIG1-209ENST00000596104 ASH1LQ9NR48 2969 aaKnown RBP10.29□□□□□ -0.76
LIG1-209ENST00000596104 PLXNA2O75051 1894 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 PLRG1O43660 514 aaKnown RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 RTN2O75298 545 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 APOEP02649 317 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 GLDCP23378 1020 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 MAT2AP31153 395 aaKnown RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 NUDT1P36639 197 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 NUMBP49757 651 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 PLK1P53350 603 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 PITX1P78337 314 aaPredicted RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 LRRC63Q05C16 580 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 TBC1D25Q3MII6 688 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 AGBL4Q5VU57 503 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CXorf57Q6NSI4 855 aaKnown RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 TRIM69Q86WT6 500 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 ERICH1Q86X53 443 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CIR1Q86X95 450 aaPredicted RBP10.28□□□□□ -0.76
LIG1-209ENST00000596104 ARHGEF19Q8IW93 802 aa10.28□□□□□ -0.76
LIG1-209ENST00000596104 CCAR2Q8N163 923 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms