RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 PABPC3Q9H361 631 aaKnown RBP15.32■□□□□ 0.04
SF3A2-207ENST00000592839 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 STIM2Q9P246 746 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 ANGPTL2Q9UKU9 493 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 WASF3Q9UPY6 502 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 HS3ST2Q9Y278 367 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.32■□□□□ 0.04
SF3A2-207ENST00000592839 ADAMTS9Q9P2N4 1935 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 USP24Q9UPU5 2620 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 CABIN1Q9Y6J0 2220 aa15.32■□□□□ 0.04
SF3A2-207ENST00000592839 ALOX15BO15296 676 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 ATP9BO43861 1147 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SIN3BO75182 1162 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 DNTTP04053 509 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SYPP08247 313 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 GNSP15586 552 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 STAT1P42224 750 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 PTPN9P43378 593 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 KLK7P49862 253 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 POLR2FP61218 127 aaKnown RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 TYRO3Q06418 890 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SFSWAPQ12872 951 aaKnown RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 ELAVL3Q14576 367 aaKnown RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SYCP1Q15431 976 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 FAM102AQ5T9C2 384 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 MMS22LQ6ZRQ5 1243 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SETD3Q86TU7 594 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 PHF13Q86YI8 300 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 APCDD1Q8J025 514 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 FEM1AQ9BSK4 669 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 SYT11Q9BT88 431 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 GPR174Q9BXC1 333 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 WDCPQ9H6R7 721 aa15.31■□□□□ 0.04
SF3A2-207ENST00000592839 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 ATXN2Q99700 1313 aaKnown RBP15.31■□□□□ 0.04
SF3A2-207ENST00000592839 TCRBV5S1A1TA0A578 114 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 ADCY5O95622 1261 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 ACSL1P33121 698 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
SF3A2-207ENST00000592839 IRAK1P51617 712 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 MANEALQ5VSG8 457 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 DCAF12L1Q5VU92 463 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 ZNF783Q6ZMS7 281 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 DBX2Q6ZNG2 339 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 STRADAQ7RTN6 431 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 ZNF366Q8N895 744 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 OR52K2Q8NGK3 314 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 CENPIQ92674 756 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-207ENST00000592839 RPRD1AQ96P16 312 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-207ENST00000592839 FAM129BQ96TA1 746 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 TBCBQ99426 244 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 FUCA2Q9BTY2 467 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 BTBD1Q9H0C5 482 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 TKTL2Q9H0I9 626 aa15.3■□□□□ 0.04
SF3A2-207ENST00000592839 CACNA1GO43497 2377 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 C2CD4BA6NLJ0 364 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 PES1O00541 588 aaKnown RBP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SLC7A4O43246 635 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 GFPT2O94808 682 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SEMA4FO95754 770 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 ADH1BP00325 375 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 CTSOP43234 321 aaPredicted RBP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 GRIA4P48058 902 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SULT1E1P49888 294 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 NME3Q13232 169 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 HNRNPDQ14103 355 aaKnown RBP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 CST6Q15828 149 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 TAF3Q5VWG9 929 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 NAA35Q5VZE5 725 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 DCAF4L2Q8NA75 395 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 C3orf20Q8ND61 904 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
SF3A2-207ENST00000592839 PDCL3Q9H2J4 239 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 SLCO3A1Q9UIG8 710 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 VANGL2Q9ULK5 521 aa15.29■□□□□ 0.04
SF3A2-207ENST00000592839 ASPMQ8IZT6 3477 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 TTC34A8MYJ7 566 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 BCAT2O15382 392 aaPredicted RBP15.28■□□□□ 0.04
SF3A2-207ENST00000592839 RNASEH1O60930 286 aaKnown RBP15.28■□□□□ 0.04
SF3A2-207ENST00000592839 CFIP05156 583 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 C5AR1P21730 350 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 CLCN6P51797 869 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 DEUP1Q05D60 604 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 SCAPQ12770 1279 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 GRIK2Q13002 908 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 SH3PXD2AQ5TCZ1 1133 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 IL27RAQ6UWB1 636 aa15.28■□□□□ 0.04
SF3A2-207ENST00000592839 CIR1Q86X95 450 aaPredicted RBP15.28■□□□□ 0.04
SF3A2-207ENST00000592839 SH2D3CQ8N5H7 860 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms