RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
CCDC43-205ENST00000592333 A0A1W2PP55 124 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 TTC34A8MYJ7 566 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 MID1O15344 667 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 YKT6O15498 198 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 SLC7A4O43246 635 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 TNFSF14O43557 240 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 USP8P40818 1118 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 C21orf59P57076 290 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 ARHGAP44Q17R89 818 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 C5orf22Q49AR2 442 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 LRSAM1Q6UWE0 723 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 MMS22LQ6ZRQ5 1243 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 SLC26A9Q7LBE3 791 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 TMPRSS7Q7RTY8 843 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 SLCO6A1Q86UG4 719 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 IRF2BP1Q8IU81 584 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
CCDC43-205ENST00000592333 APCDD1Q8J025 514 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 GALNT15Q8N3T1 639 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 SPAG5Q96R06 1193 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 MTG2Q9H4K7 406 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 ACP6Q9NPH0 428 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 SLCO1B1Q9Y6L6 691 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 WDFY3Q8IZQ1 3526 aa19.45■□□□□ 0.7
CCDC43-205ENST00000592333 ALOX15BO15296 676 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 CLDN11O75508 207 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 RNASEH2AO75792 299 aaKnown RBP19.44■□□□□ 0.7
CCDC43-205ENST00000592333 CDK4P11802 303 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 NOS2P35228 1153 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 KRT9P35527 623 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 SCNN1AP37088 669 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 CTSOP43234 321 aaPredicted RBP19.44■□□□□ 0.7
CCDC43-205ENST00000592333 SLC6A3Q01959 620 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 FAM46CQ5VWP2 391 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 NCEH1Q6PIU2 408 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 OLFML1Q6UWY5 402 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 PROSER1Q86XN7 944 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 RNF34Q969K3 372 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 TOR4AQ9NXH8 423 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 PAXBP1Q9Y5B6 917 aa19.44■□□□□ 0.7
CCDC43-205ENST00000592333 A0A1B0GTQ1 180 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 LATO43561 262 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 ATP9BO43861 1147 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 MZF1P28698 734 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-205ENST00000592333 AUHQ13825 339 aaKnown RBP19.43■□□□□ 0.7
CCDC43-205ENST00000592333 TAF5Q15542 800 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 MAN2A1Q16706 1144 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 SLC45A4Q5BKX6 768 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 CXorf57Q6NSI4 855 aaKnown RBP19.43■□□□□ 0.7
CCDC43-205ENST00000592333 FBXL22Q6P050 247 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 GJB7Q6PEY0 223 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 CREBRFQ8IUR6 639 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 FRS2Q8WU20 508 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 PGAP3Q96FM1 320 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-205ENST00000592333 RPRD1AQ96P16 312 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-205ENST00000592333 DKK4Q9UBT3 224 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 SERGEFQ9UGK8 458 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 DNAJC12Q9UKB3 198 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 TBC1D30Q9Y2I9 924 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 CABIN1Q9Y6J0 2220 aa19.43■□□□□ 0.7
CCDC43-205ENST00000592333 KNL1Q8NG31 2342 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 DMXL2Q8TDJ6 3036 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 PKD1L2Q7Z442 2459 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 H0Y8X5 98 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 DAB1O75553 588 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 F9P00740 461 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 IL1BP01584 269 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 PDGFRAP16234 1089 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 CD38P28907 300 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 CDH5P33151 784 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 CLCN1P35523 988 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 MTIF2P46199 727 aaKnown RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ADPRHP54922 357 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 PITX1P78337 314 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 OVGP1Q12889 678 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ZNF177Q13360 481 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 CAMK4Q16566 473 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 TPD52L1Q16890 204 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 CT47A1Q5JQC4 288 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 BRMS1LQ5PSV4 323 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 OR6B2Q6IFH4 312 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 FAM71AQ8IYT1 594 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 STK40Q8N2I9 435 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 AADATQ8N5Z0 425 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 PNPLA1Q8N8W4 532 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 NT5C3BQ969T7 300 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ALG14Q96F25 216 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 RPL10LQ96L21 214 aaKnown RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ELF4Q99607 663 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-205ENST00000592333 FEM1AQ9BSK4 669 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 SYNCQ9H7C4 482 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 ERVMER34-1Q9H9K5 563 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 SIX2Q9NPC8 291 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 SLC25A13Q9UJS0 675 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 STAP1Q9ULZ2 295 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 SPEGQ15772 3267 aa19.42■□□□□ 0.7
CCDC43-205ENST00000592333 FAM47DPA6NHR8 397 aa19.41■□□□□ 0.7
CCDC43-205ENST00000592333 MCF2LO15068 1137 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms