RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GGA2Q9UJY4 613 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 HCN2Q9UL51 889 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCA4-213ENST00000587988 OR51B4Q9Y5P0 310 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 TECTAO75443 2155 aa11□□□□□ -0.65
SMARCA4-213ENST00000587988 NUP205Q92621 2012 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ATG2BQ96BY7 2078 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TBC1D3BA6NDS4 549 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TMEM221A6NGB7 291 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 M0R296 226 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TNFRSF10AO00220 468 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 FGF10O15520 208 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ZRANB2O95218 330 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 APODP05090 189 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RHOCP08134 193 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 PYGMP11217 842 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 CHRNB1P11230 501 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ALADP13716 330 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 GRIA2P42262 883 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 CDKN2BP42772 138 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 MAPKAPK2P49137 400 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RWDD2BP57060 319 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ADCY2Q08462 1091 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 GRSF1Q12849 480 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 UBXN2BQ14CS0 331 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TAZQ16635 292 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 FUT11Q495W5 492 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 EMC10Q5UCC4 262 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RNF219Q5W0B1 726 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 SPOCD1Q6ZMY3 1216 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 SETD3Q86TU7 594 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ADIPOR2Q86V24 386 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 MAP7D3Q8IWC1 876 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TP53INP2Q8IXH6 220 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RCOR2Q8IZ40 523 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 NPWQ8N729 165 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 PQLC3Q8N755 202 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 OR7D4Q8NG98 312 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 EXD1Q8NHP7 514 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 SORCS1Q8WY21 1168 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 TRIM44Q96DX7 344 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 CELF6Q96J87 481 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RNF157Q96PX1 679 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF670Q9BS34 389 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 FEM1AQ9BSK4 669 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 SLC39A8Q9C0K1 460 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 ZDHHC4Q9NPG8 344 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RBM12Q9NTZ6 932 aaKnown RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 RCOR3Q9P2K3 495 aaPredicted RBP10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
SMARCA4-213ENST00000587988 hCG_1818297A0A087WSY0 165 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ILVBLA1L0T0 632 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 FAM170BA6NMN3 283 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 MIF4GDA9UHW6 222 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 STK25O00506 426 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ENC1O14682 589 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 KIF5CO60282 957 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 KRT10P13645 584 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 DRD1P21728 446 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 GLDCP23378 1020 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ACVRL1P37023 503 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CTSOP43234 321 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 PLK1P53350 603 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 SEC13P55735 322 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 GNA12Q03113 381 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF211Q13398 564 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CCINQ13939 588 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 PLEKHG6Q3KR16 790 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ODF2Q5BJF6 829 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 PITRM1Q5JRX3 1037 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 C6orf118Q5T5N4 469 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 MBLAC2Q68D91 279 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 NCBP2-AS2Q69YL0 99 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 C1orf228Q6PIY5 440 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 VSIG1Q86XK7 387 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CCDC50Q8IVM0 306 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CCDC117Q8IWD4 279 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ARHGAP12Q8IWW6 846 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 UMODL1-AS1Q8N2C9 162 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CCDC33Q8N5R6 958 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 UBL4BQ8N7F7 174 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF557Q8N988 423 aaPredicted RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 FLCNQ8NFG4 579 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ARHGEF2Q92974 986 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 PSMB7Q99436 277 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 HERPUD2Q9BSE4 406 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 TLR10Q9BXR5 811 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 MUC3BQ9H195 1237 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 LRRC19Q9H756 370 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 LMAN1LQ9HAT1 526 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ZKSCAN5Q9Y2L8 839 aa10.98□□□□□ -0.65
SMARCA4-213ENST00000587988 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms