RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 C1orf228Q6PIY5 440 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 NPNTQ6UXI9 565 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CHST9Q7L1S5 443 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SLC13A5Q86YT5 568 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 FAM71BQ8TC56 605 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 ZNF670Q9BS34 389 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 RBM12Q9NTZ6 932 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 RCOR3Q9P2K3 495 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SAE1Q9UBE0 346 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 FBXL21Q9UKT6 434 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CA14Q9ULX7 337 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CLEC4EQ9ULY5 219 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 R3HDM2Q9Y2K5 976 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 PIAS3Q9Y6X2 628 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CACNG3O60359 315 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 TULP3O75386 442 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 PRLRP16471 622 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 HOXC13P31276 330 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 DPYSQ14117 519 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 IER5LQ5T953 404 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 UBALD2Q8IYN6 164 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 RASGEF1CQ8N431 466 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 RTL3Q8N8U3 475 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 NOA1Q8NC60 698 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 PCDH19Q8TAB3 1148 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 FIBINQ8TAL6 211 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 RNF157Q96PX1 679 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 HINFPQ9BQA5 517 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SLC2A11Q9BYW1 496 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 C10orf88Q9H8K7 445 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 NDFIP2Q9NV92 336 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 TMEM248Q9NWD8 314 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 DONSONQ9NYP3 566 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 DEC1Q9P2X7 70 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 NEU3Q9UQ49 428 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CTAGE15A4D2H0 777 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 TRIM24O15164 1050 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CST8O60676 142 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 RHOCP08134 193 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CTAGE8P0CG41 777 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 PECAM1P16284 738 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CTHP32929 405 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CD70P32970 193 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 DGKGP49619 791 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 COPS2P61201 443 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 KDSRQ06136 332 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 TFDP3Q5H9I0 405 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 FSCBQ5H9T9 825 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 C6orf118Q5T5N4 469 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 TPRG1Q6ZUI0 275 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CTAGE6Q86UF2 777 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 NLRP14Q86W24 1093 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 RALGPS2Q86X27 583 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CTAGE4Q8IX94 777 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 ZNF557Q8N988 423 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 WFDC5Q8TCV5 224 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 CHFRQ96EP1 664 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 PNKPQ96T60 521 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 KRT12Q99456 494 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 DDX47Q9H0S4 455 aaKnown RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 MUC3BQ9H195 1237 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 RETREG1Q9H6L5 497 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 ABCB8Q9NUT2 735 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 ETNK2Q9NVF9 386 aa11.24□□□□□ -0.61
TOP3A-216ENST00000583804 KIAA1522Q9P206 1035 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-216ENST00000583804 TBC1D3BA6NDS4 549 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 EFCAB8A8MWE9 144 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-216ENST00000583804 APOL1O14791 398 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 DCLK1O15075 740 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 RAMP2O60895 175 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 CISD3P0C7P0 127 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 GLULP15104 373 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-216ENST00000583804 HLA-FP30511 346 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 OPRD1P41143 372 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 CSKP41240 450 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 KCNJ1P48048 391 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 MAPKAPK2P49137 400 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 GALK1P51570 392 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 OXCT1P55809 520 aa11.23□□□□□ -0.61
TOP3A-216ENST00000583804 LMAN2Q12907 356 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms