RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 C8orf76Q96K31 380 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 CCDC3Q9BQI4 270 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 SLCO3A1Q9UIG8 710 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 UBE4BO95155 1302 aa11.49□□□□□ -0.57
GGA3-206ENST00000578773 GOLGA6L7A0A1B0GV03 622 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 C9orf172C9J069 976 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 NTN3O00634 580 aaPredicted RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 PLRG1O43660 514 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 RNASEH1O60930 286 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 TCEA3O75764 348 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 IL1BP01584 269 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 GARTP22102 1010 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 SCP2P22307 547 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 STK19P49842 368 aaPredicted RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 TAS2R38P59533 333 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 OVGP1Q12889 678 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 GNL2Q13823 731 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 SPIDRQ14159 915 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 E2F5Q15329 346 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 DUOXA2Q1HG44 320 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 AGBL4Q5VU57 503 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 ZCCHC8Q6NZY4 707 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 MAMDC2Q7Z304 686 aaPredicted RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 TMPRSS9Q7Z410 1059 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 ATCAYQ86WG3 371 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 GPD1LQ8N335 351 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 ZSCAN1Q8NBB4 408 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 RAD54LQ92698 747 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 PTPRN2Q92932 1015 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 PMEPA1Q969W9 287 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 FAM131CQ96AQ9 280 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 DCLK3Q9C098 648 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 TCEAL2Q9H3H9 227 aaPredicted RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 USP29Q9HBJ7 922 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 NOL7Q9UMY1 257 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
GGA3-206ENST00000578773 SVILO95425 2214 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 TACC2O95359 2948 aa11.48□□□□□ -0.57
GGA3-206ENST00000578773 DCHS2Q6V1P9 2916 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 PRAMEF26H0Y7S4 382 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 RNF103O00237 685 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 DUX1O43812 170 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 MAGEC1O60732 1142 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 ATP5BP06576 529 aaKnown RBP11.47□□□□□ -0.57
GGA3-206ENST00000578773 C5AR1P21730 350 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 SLC6A4P31645 630 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 ARSDP51689 593 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 KIF11P52732 1056 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 PDE4CQ08493 712 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 CNTN1Q12860 1018 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 FZD2Q14332 565 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 NR0B2Q15466 257 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 ZC3H18Q86VM9 953 aaKnown RBP11.47□□□□□ -0.57
GGA3-206ENST00000578773 TRIM69Q86WT6 500 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 RBFAQ8N0V3 343 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 USP7Q93009 1102 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 ABHD17AQ96GS6 310 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 RPL10LQ96L21 214 aaKnown RBP11.47□□□□□ -0.57
GGA3-206ENST00000578773 ACCSQ96QU6 501 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 TWNKQ96RR1 684 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 MARCH2Q9P0N8 246 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
GGA3-206ENST00000578773 ERVW-1Q9UQF0 538 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 LOXL2Q9Y4K0 774 aa11.47□□□□□ -0.57
GGA3-206ENST00000578773 A0A1W2PQM1 296 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 PRR19A6NJB7 356 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 TBL1XO60907 577 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 RNGTTO60942 597 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 GCNT3O95395 438 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 ADH1BP00325 375 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 LDHAP00338 332 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 DLATP10515 647 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 LIFP15018 202 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 MAPK10P53779 464 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 CCL7P80098 99 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 COG7P83436 770 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 TRIP4Q15650 581 aaPredicted RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 SETMARQ53H47 684 aaPredicted RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 FSCBQ5H9T9 825 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 WDR49Q8IV35 697 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 TTC17Q96AE7 1141 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 POM121Q96HA1 1249 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 PRICKLE1Q96MT3 831 aaPredicted RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.57
GGA3-206ENST00000578773 STIM2Q9P246 746 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 TUBD1Q9UJT1 453 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 TP53TG5Q9Y2B4 290 aa11.46□□□□□ -0.57
GGA3-206ENST00000578773 CHD5Q8TDI0 1954 aa11.45□□□□□ -0.58
GGA3-206ENST00000578773 ITIH6Q6UXX5 1313 aa11.45□□□□□ -0.58
GGA3-206ENST00000578773 D6RAR5 112 aa11.45□□□□□ -0.58
GGA3-206ENST00000578773 MSI1O43347 362 aaKnown RBP11.45□□□□□ -0.58
GGA3-206ENST00000578773 GCATO75600 419 aa11.45□□□□□ -0.58
GGA3-206ENST00000578773 CELA2BP08218 269 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms