RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ARTNQ5T4W7 220 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 DCAF12L1Q5VU92 463 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 CREG2Q8IUH2 290 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 ARID3BQ8IVW6 561 aaPredicted RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 GALNT12Q8IXK2 581 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 ACTRT1Q8TDG2 376 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 SUSD6Q92537 303 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 FGF13Q92913 245 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 PMEPA1Q969W9 287 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 FAF2Q96CS3 445 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 ZSWIM3Q96MP5 696 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 GUCD1Q96NT3 240 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 ZNF670Q9BS34 389 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 DHX35Q9H5Z1 703 aaKnown RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 TRPC7Q9HCX4 862 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.27□□□□□ -1.09
COPS3-215ENST00000578317 OBP2AQ9NY56 170 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 COX16Q9P0S2 106 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 PPARGC1AQ9UBK2 798 aaKnown RBP8.27□□□□□ -1.09
COPS3-215ENST00000578317 OR12D3Q9UGF7 316 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 CDC23Q9UJX2 597 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 CDH7Q9ULB5 785 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 CPQQ9Y646 472 aa8.27□□□□□ -1.09
COPS3-215ENST00000578317 IGLV3-10A0A075B6K4 115 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 E2F8A0AVK6 867 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 DRGXA6NNA5 263 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 GFRA2O00451 464 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 ACSL4O60488 711 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 PAGE1O75459 146 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 CEBPBP17676 345 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 GRNP28799 593 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 HOXC13P31276 330 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 CDKN2BP42772 138 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 CDH6P55285 790 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 DPYSL3Q14195 570 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 CBX2Q14781 532 aaPredicted RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 CA9Q16790 459 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 ODF2Q5BJF6 829 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 TFDP3Q5H9I0 405 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 MS4A13Q5J8X5 152 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 STXBP5Q5T5C0 1151 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 ADGRF1Q5T601 910 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 MANEALQ5VSG8 457 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 MFSD7Q6UXD7 560 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 SPOCD1Q6ZMY3 1216 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 FAM217AQ8IXS0 508 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 ZNF683Q8IZ20 524 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 COG1Q8WTW3 980 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 MYLIPQ8WY64 445 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 HSPH1Q92598 858 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 SMARCD2Q92925 531 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 USP13Q92995 863 aaPredicted RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 E2F7Q96AV8 911 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 RNF157Q96PX1 679 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 NAP1L3Q99457 506 aaPredicted RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 PRMT1Q99873 361 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 DDX50Q9BQ39 737 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 OSBPL8Q9BZF1 889 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 CHRDQ9H2X0 955 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 KIF9Q9HAQ2 790 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 CWC15Q9P013 229 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 GGT7Q9UJ14 662 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 AGO1Q9UL18 857 aaKnown RBP8.26□□□□□ -1.09
COPS3-215ENST00000578317 HS3ST4Q9Y661 456 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 MYO9BQ13459 2157 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 UNC80Q8N2C7 3258 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 PATJQ8NI35 1801 aa8.26□□□□□ -1.09
COPS3-215ENST00000578317 LRRD1A4D1F6 860 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM72CH0Y354 149 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 LEFTY2O00292 366 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CEP104O60308 925 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SRGAP2O75044 1071 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 LRIG2O94898 1065 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 TJP3O95049 919 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 KRT1P04264 644 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CD48P09326 243 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CORO1AP31146 461 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 CXCR5P32302 372 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 ARL4AP40617 200 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 KLF1Q13351 362 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 AUHQ13825 339 aaKnown RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 TFDP2Q14188 446 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 KRT81Q14533 505 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 WHAMMP3Q1A5X7 153 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM72AQ5TYM5 149 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 PIK3R6Q5UE93 754 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM72DQ6L9T8 149 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 FAM72BQ86X60 149 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 SLC13A5Q86YT5 568 aaPredicted RBP8.25□□□□□ -1.09
COPS3-215ENST00000578317 PGBD3Q8N328 593 aa8.25□□□□□ -1.09
COPS3-215ENST00000578317 CPXM2Q8N436 756 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms