RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CLCN5P51795 746 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 SEC13P55735 322 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 DPYSQ14117 519 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 DPYSL3Q14195 570 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 E2F5Q15329 346 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 FUT11Q495W5 492 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 RNF219Q5W0B1 726 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 NT5DC3Q86UY8 548 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CCDC105Q8IYK2 499 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 RAPGEF5Q92565 580 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 TSC1Q92574 1164 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 EZH1Q92800 747 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-217ENST00000575711 LMLNQ96KR4 655 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CSPG4P5Q96PW8 444 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
RPAIN-217ENST00000575711 ELOVL2Q9NXB9 296 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF212Q9UDV6 495 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 DNAI1Q9UI46 699 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 VPS28Q9UK41 221 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 PYCARDQ9ULZ3 195 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 STARD13Q9Y3M8 1113 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
RPAIN-217ENST00000575711 MYOFQ9NZM1 2061 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CCDC66A2RUB6 948 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 FAM86C2PA6NEL3 165 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 DLL1O00548 723 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 RAMP2O60895 175 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 RNF40O75150 1001 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 FTCDO95954 541 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 DCNP07585 359 aaKnown RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 ERCC2P18074 760 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 CTNNA2P26232 953 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 MZF1P28698 734 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 ETFBP38117 255 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 MAGEA9P43362 315 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 PLK1P53350 603 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 MRPS21P82921 87 aaKnown RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 FZD5Q13467 585 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 PLEKHG6Q3KR16 790 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 MBLAC2Q68D91 279 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 KATNAL2Q8IYT4 538 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 FBXL6Q8N531 539 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 UBL4BQ8N7F7 174 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 TRIM58Q8NG06 486 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 OR52K2Q8NGK3 314 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 KCNV2Q8TDN2 545 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 UBE2Q2Q8WVN8 375 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 KRT35Q92764 455 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 CLDN23Q96B33 292 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 FEM1AQ9BSK4 669 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 TRMT1Q9NXH9 659 aaKnown RBP14.35□□□□□ -0.11
RPAIN-217ENST00000575711 PCDHA3Q9Y5H8 950 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 KIAA1549LQ6ZVL6 1849 aa14.35□□□□□ -0.11
RPAIN-217ENST00000575711 TTC28Q96AY4 2481 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 GOLGA6L9A6NEM1 432 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF487B1APH4 448 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 GPR37L1O60883 481 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 ASLP04424 464 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 AMPD1P23109 780 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 IL4RP24394 825 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TIE1P35590 1138 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 KIR2DL1P43626 348 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 GNA12Q03113 381 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 SULT2A1Q06520 285 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 ANKRD20A8PQ5CZ79 823 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TMEM215Q68D42 235 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TMCO3Q6UWJ1 677 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TRMT11Q7Z4G4 463 aaKnown RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 VSIG1Q86XK7 387 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 RCOR2Q8IZ40 523 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 APCDD1Q8J025 514 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 LZTR1Q8N653 840 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TTC17Q96AE7 1141 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 RNF25Q96BH1 459 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 ALG14Q96F25 216 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 RBM41Q96IZ5 413 aaKnown RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 IER2Q9BTL4 223 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 MAK16Q9BXY0 300 aaKnown RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 MAGEH1Q9H213 219 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 CHRDQ9H2X0 955 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 INTS6Q9UL03 887 aaKnown RBP14.34□□□□□ -0.11
RPAIN-217ENST00000575711 TECTAO75443 2155 aa14.34□□□□□ -0.11
RPAIN-217ENST00000575711 NCOR1O75376 2440 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 A0A0D9SEW6 157 aa14.33□□□□□ -0.12
RPAIN-217ENST00000575711 PRR33A8MZF0 331 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms