RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	IRAK1	P51617	712 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SGSH	P51688	502 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	PPID	Q08752	370 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SLC12A1	Q13621	1099 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	POLD3	Q15054	466 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SMAD2	Q15796	467 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	EML3	Q32P44	896 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SLC45A4	Q5BKX6	768 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FYB2	Q5VWT5	728 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	CCDC70	Q6NSX1	233 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	TTC27	Q6P3X3	843 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	DARS2	Q6PI48	645 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	RHBDF2	Q6PJF5	856 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	VIT	Q6UXI7	678 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	TPGS1	Q6ZTW0	290 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	TFAP2D	Q7Z6R9	452 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	TMEM25	Q86YD3	366 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	KLHL7	Q8IXQ5	586 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	YAF2	Q8IY57	180 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	CCDC105	Q8IYK2	499 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	NPW	Q8N729	165 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FIBIN	Q8TAL6	211 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	TFB1M	Q8WVM0	346 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	PPM1E	Q8WY54	764 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	ATG4A	Q8WYN0	398 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	ATP2A3	Q93084	1043 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FATE1	Q969F0	183 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	NXPE3	Q969Y0	559 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	HDAC11	Q96DB2	347 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	KRT12	Q99456	494 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FERMT1	Q9BQL6	677 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FAM83C	Q9BQN1	747 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	PHF7	Q9BWX1	381 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SLC2A11	Q9BYW1	496 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	SLC39A8	Q9C0K1	460 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	DDX47	Q9H0S4	455 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	NOL6	Q9H6R4	1146 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	NDFIP2	Q9NV92	336 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	ZNF148	Q9UQR1	794 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	FAM50B	Q9Y247	325 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	MFHAS1	Q9Y4C4	1052 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	WNT6	Q9Y6F9	365 aa		12.21	□□□□□ -0.45
PRPF8-212	ENST00000575116	LAMA3	Q16787	3333 aa		12.21	□□□□□ -0.46
PRPF8-212	ENST00000575116	DOCK8	Q8NF50	2099 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	CXorf51A	A0A1B0GTR3	108 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	FAM187A	A6NFU0	413 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	RASA4B	C9J798	803 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	SCAMP3	O14828	347 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	CHAD	O15335	359 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	RASA4	O43374	803 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	RAMP2	O60895	175 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	GAS8	O95995	478 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	ADH1C	P00326	375 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	HOXD9	P28356	352 aa	Predicted RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	GARS	P41250	739 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	PAPOLA	P51003	745 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	DR1	Q01658	176 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	GNA12	Q03113	381 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	GAD2	Q05329	585 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	NR1H3	Q13133	447 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	SNX1	Q13596	522 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	PRKD1	Q15139	912 aa	Predicted RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	DHCR24	Q15392	516 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	LY6G5C	Q5SRR4	150 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	PARM1	Q6UWI2	310 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	ZC3H18	Q86VM9	953 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	CIR1	Q86X95	450 aa	Predicted RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	CARNMT1	Q8N4J0	409 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	RSAD2	Q8WXG1	361 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	CELF6	Q96J87	481 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	TRMT61B	Q9BVS5	477 aa	Known RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	BBS2	Q9BXC9	721 aa		12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.2	□□□□□ -0.46
PRPF8-212	ENST00000575116	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	DFFA	O00273	331 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	HOXC11	O43248	304 aa	Predicted RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	ECEL1	O95672	775 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	CYP17A1	P05093	508 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	RHOC	P08134	193 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	PTGIR	P43119	386 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	KCNJ1	P48048	391 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	PLK1	P53350	603 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	SERINC3	Q13530	473 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	CDH18	Q13634	790 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	HTR4	Q13639	388 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	HEATR6	Q6AI08	1181 aa	Known RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	CXorf57	Q6NSI4	855 aa	Known RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	TIGD7	Q6NT04	549 aa	Predicted RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	C8orf74	Q6P047	294 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	C4orf22	Q6V702	233 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	GSTA5	Q7RTV2	222 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	MFN1	Q8IWA4	741 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	ALLC	Q8N6M5	410 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	NOA1	Q8NC60	698 aa	Known RBP	12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	CCNY	Q8ND76	341 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	CCHCR1	Q8TD31	782 aa		12.19	□□□□□ -0.46
PRPF8-212	ENST00000575116	FGF14	Q92915	247 aa		12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms