RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 KAT7O95251 611 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 DRD1P21728 446 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 GALK1P51570 392 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 EIF4HQ15056 248 aaKnown RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 PON2Q15165 354 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 FSCBQ5H9T9 825 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 NAIF1Q69YI7 327 aaPredicted RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 KIAA0907Q7Z7F0 614 aaPredicted RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 UMODL1-AS1Q8N2C9 162 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 SLC35F6Q8N357 371 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 LMLNQ96KR4 655 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 RNF157Q96PX1 679 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 SHISA7A6NL88 538 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 RAMP2O60895 175 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 AMPD1P23109 780 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 CD70P32970 193 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 PTPN7P35236 360 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 ASTLQ6HA08 431 aaPredicted RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 PCDH19Q8TAB3 1148 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 NELL2Q99435 816 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 MAK16Q9BXY0 300 aaKnown RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.54■□□□□ 0.4
NUP88-210ENST00000574867 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
NUP88-210ENST00000574867 F5P12259 2224 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 CHD5Q8TDI0 1954 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 A0A0A0MRY4 1105 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 KANSL1LA0AUZ9 987 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 CSKP41240 450 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 DNA2P51530 1060 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 NDST2P52849 883 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 PLK1P53350 603 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 YBEYP58557 167 aaPredicted RBP17.53■□□□□ 0.4
NUP88-210ENST00000574867 GNA12Q03113 381 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 PLEKHG6Q3KR16 790 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 C17orf53Q8N3J3 647 aaPredicted RBP17.53■□□□□ 0.4
NUP88-210ENST00000574867 CCDC26Q8TAB7 109 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 TLR10Q9BXR5 811 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 MUC3BQ9H195 1237 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 MAGEH1Q9H213 219 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 CARD9Q9H257 536 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 NDFIP2Q9NV92 336 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 VCANP13611 3396 aa17.53■□□□□ 0.4
NUP88-210ENST00000574867 hCG_1818297A0A087WSY0 165 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TBC1D3BA6NDS4 549 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TRIM24O15164 1050 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 ZFXP17010 805 aaPredicted RBP17.52■□□□□ 0.4
NUP88-210ENST00000574867 GNG11P61952 73 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TFDP2Q14188 446 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 PARP15Q460N3 678 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 PITRM1Q5JRX3 1037 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.4
NUP88-210ENST00000574867 SLC9A4Q6AI14 798 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TRIM67Q6ZTA4 783 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 FEM1AQ9BSK4 669 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TBC1D17Q9HA65 648 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 LTB4R2Q9NPC1 389 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 BDP1A6H8Y1 2624 aa17.52■□□□□ 0.4
NUP88-210ENST00000574867 TNFRSF4P43489 277 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 MESP2Q0VG99 397 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 POLD3Q15054 466 aaPredicted RBP17.52■□□□□ 0.39
NUP88-210ENST00000574867 PAFAH1B3Q15102 231 aaKnown RBP17.52■□□□□ 0.39
NUP88-210ENST00000574867 E2F5Q15329 346 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 GEN1Q17RS7 908 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 FUT11Q495W5 492 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 FBXO43Q4G163 708 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 NCBP2-AS2Q69YL0 99 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 RFX6Q8HWS3 928 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 PQLC3Q8N755 202 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 DCAF4L2Q8NA75 395 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 OR52K2Q8NGK3 314 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 C2orf49Q9BVC5 232 aaPredicted RBP17.52■□□□□ 0.39
NUP88-210ENST00000574867 FBRSL1Q9HCM7 1045 aaKnown RBP17.52■□□□□ 0.39
NUP88-210ENST00000574867 VPS28Q9UK41 221 aa17.52■□□□□ 0.39
NUP88-210ENST00000574867 APOL1O14791 398 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 TIMM44O43615 452 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 PYGMP11217 842 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 SULT2A1Q06520 285 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 LRRC32Q14392 662 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 AFMIDQ63HM1 303 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 ADIPOR2Q86V24 386 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 NPWQ8N729 165 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 UCMAQ8WVF2 138 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 ALG14Q96F25 216 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 OSBPL6Q9BZF3 934 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 LRRC19Q9H756 370 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 ETNK2Q9NVF9 386 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 NDRG2Q9UN36 371 aaKnown RBP17.51■□□□□ 0.39
NUP88-210ENST00000574867 OR51B4Q9Y5P0 310 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 KCNK3O14649 394 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 ASLP04424 464 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 POLR2EP19388 210 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms