RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 FAM46CQ5VWP2 391 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 KANSL1Q7Z3B3 1105 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 PRICKLE2Q7Z3G6 844 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 SPATS2Q86XZ4 545 aaKnown RBP12.35□□□□□ -0.43
CTNS-208ENST00000574218 GRAMD1CQ8IYS0 662 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 MED8Q96G25 268 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 HIC2Q96JB3 615 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 MRGPRX3Q96LB0 322 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 POLR1BQ9H9Y6 1135 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 CNGB3Q9NQW8 809 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 CYTH4Q9UIA0 394 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
CTNS-208ENST00000574218 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 C1QTNF3-AMACRE9PGA6 284 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 PRAMEF26H0Y7S4 382 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 TULP2O00295 520 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 TRIM38O00635 465 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 SLC7A4O43246 635 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 OPA1O60313 960 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
CTNS-208ENST00000574218 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
CTNS-208ENST00000574218 SETSIPP0DME0 302 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 SLC6A4P31645 630 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 GTF2H1P32780 548 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 ME1P48163 572 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 MXI1P50539 228 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 DAOAP59103 153 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 ENPEPQ07075 957 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
CTNS-208ENST00000574218 BHLHA9Q7RTU4 235 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 OR4C6Q8NH72 309 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 VCPIP1Q96JH7 1222 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 FAM129BQ96TA1 746 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 SEMA4CQ9C0C4 833 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
CTNS-208ENST00000574218 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
CTNS-208ENST00000574218 NEMP2A6NFY4 417 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 CYSRT1A8MQ03 144 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 KLRC4O43908 158 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 THEGLP0DJG4 465 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 ZNF18P17022 549 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 SULT2A1Q06520 285 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 POM121L1PQ3SYA9 428 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 MMS22LQ6ZRQ5 1243 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 TRIM69Q86WT6 500 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 MAPK15Q8TD08 544 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 KCTD13Q8WZ19 329 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 IRGQQ8WZA9 623 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 TTC9Q92623 222 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 USP29Q9HBJ7 922 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
CTNS-208ENST00000574218 TJP2Q9UDY2 1190 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
CTNS-208ENST00000574218 KIF26BQ2KJY2 2108 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 TRPM6Q9BX84 2022 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 A0A1B0GVM2 712 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
CTNS-208ENST00000574218 RTN2O75298 545 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 IGLV3-27P01718 113 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 APOEP02649 317 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 LTFP02788 710 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 GP1BAP07359 652 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 VDRP11473 427 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CKMT1AP12532 417 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 DGKAP23743 735 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CCDC15Q0P6D6 951 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CDCP2Q5VXM1 449 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 RESP18Q5W5W9 173 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CCDC81Q6ZN84 652 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CFAP52Q8N1V2 620 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 SCML4Q8N228 414 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 PTPRN2Q92932 1015 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 RNF34Q969K3 372 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
CTNS-208ENST00000574218 LMLNQ96KR4 655 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 MYOCQ99972 504 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms