RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 PDHA1P08559 390 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 ADORA2BP29275 332 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 PRDX6P30041 224 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 SULT1E1P49888 294 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 FAM26DQ5JW98 314 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 ZCCHC23Q6ZST2 131 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 FBXO27Q8NI29 283 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 KCTD13Q8WZ19 329 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 NPY6RQ99463 290 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 LGMNQ99538 433 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 APOL6Q9BWW8 343 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 TXNDC16Q9P2K2 825 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 COPG2Q9UBF2 871 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 SCOCQ9UIL1 159 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 SQORQ9Y6N5 450 aa17.16■□□□□ 0.34
CMTM3-213ENST00000566756 MAGEA13PA6NCF6 341 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 CCNT2O60583 730 aaKnown RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 RPL10AP62906 217 aaKnown RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 PDE1BQ01064 536 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 BTKQ06187 659 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 GLRA4Q5JXX5 417 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 FAM182AQ5T1J6 154 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 TMEM154Q6P9G4 183 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 PDZD4Q76G19 769 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 DEFB106AQ8N104 65 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 DTX3LQ8TDB6 740 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 C18orf25Q96B23 403 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 CERS2Q96G23 380 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 HNRNPABQ99729 332 aaKnown RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 HMX1Q9NP08 348 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 FAM105AQ9NUU6 356 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 A0A088AWK7 358 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 ERI2A8K979 691 aaKnown RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 ITM2AO43736 263 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 INHAP05111 366 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 PRKCGP05129 697 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 CRABP2P29373 138 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 MXRA7P84157 204 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 DEUP1Q05D60 604 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 DPYSQ14117 519 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 TRIM71Q2Q1W2 868 aaKnown RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 SV2CQ496J9 727 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 LHX8Q68G74 356 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 FAM131BQ86XD5 332 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 PYROXD2Q8N2H3 581 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 APPL2Q8NEU8 664 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-213ENST00000566756 JADE3Q92613 823 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 GATA6Q92908 595 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 SORT1Q99523 831 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 DUSP16Q9BY84 665 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 MAGEB5Q9BZ81 275 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 BRD8Q9H0E9 1235 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 LRRC40Q9H9A6 602 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 NDE1Q9NXR1 346 aa17.15■□□□□ 0.34
CMTM3-213ENST00000566756 NCAM2O15394 837 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 H2AFYO75367 372 aaKnown RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SKAP2O75563 359 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 CTSHP09668 335 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SP100P23497 879 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 TYK2P29597 1187 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 LRPAP1P30533 357 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 THPOP40225 353 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 TAF6P49848 677 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SERPINB8P50452 374 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 COPAP53621 1224 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SESN2P58004 480 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 ABCE1P61221 599 aaKnown RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 OTUD1Q5VV17 481 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-213ENST00000566756 C1orf146Q5VVC0 180 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 C16orf46Q6P387 395 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 RASSF3Q86WH2 238 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 UNC5BQ8IZJ1 945 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF567Q8N184 647 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 ARRDC4Q8NCT1 418 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SLC2A14Q8TDB8 520 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 STON2Q8WXE9 905 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 NTAN1Q96AB6 310 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 CMTM5Q96DZ9 223 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SLC2A13Q96QE2 648 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 SYBUQ9NX95 663 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 KLK14Q9P0G3 267 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 MFHAS1Q9Y4C4 1052 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 ASB3Q9Y575 518 aa17.14■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF195O14628 629 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 DCLK1O15075 740 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 MTSS1O43312 755 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 SIN3BO75182 1162 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 TOP3BO95985 862 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 MPOP05164 745 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms