RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CD48P09326 243 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 RHOQP17081 205 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 DGKGP49619 791 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 DNA2P51530 1060 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 PRKCQQ04759 706 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 SIGLEC14Q08ET2 396 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 ZNF177Q13360 481 aaPredicted RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 DPYSL3Q14195 570 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 PDK2Q15119 407 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 ARTNQ5T4W7 220 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 ANKS1BQ7Z6G8 1248 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 MAP7D3Q8IWC1 876 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 KATNAL2Q8IYT4 538 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 C17orf53Q8N3J3 647 aaPredicted RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 WFDC5Q8TCV5 224 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 RAPGEF5Q92565 580 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 P2RY13Q9BPV8 354 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 ARHGEF4Q9NR80 690 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 TMEM248Q9NWD8 314 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 RCOR3Q9P2K3 495 aaPredicted RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 DEC1Q9P2X7 70 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 CLEC4EQ9ULY5 219 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 PACSIN2Q9UNF0 486 aaPredicted RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 KRBA1A5PL33 1030 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 MAN2B1O00754 1011 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 APODP05090 189 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 RHOCP08134 193 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 PABPC1P11940 636 aaKnown RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 MSNP26038 577 aaKnown RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 HLA-FP30511 346 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 OR1E1P30953 314 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 SLC6A11P48066 632 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 MAPKAPK2P49137 400 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 ARSEP51690 589 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 LMAN2Q12907 356 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 DPYSQ14117 519 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 PON2Q15165 354 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 C6orf118Q5T5N4 469 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 CXorf57Q6NSI4 855 aaKnown RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 ZNF852Q6ZMS4 543 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 NLRP14Q86W24 1093 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 CCDC50Q8IVM0 306 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 UBL4BQ8N7F7 174 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 TERB1Q8NA31 727 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 FIBINQ8TAL6 211 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 FAM3CQ92520 227 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 TSC1Q92574 1164 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 EDAQ92838 391 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 SHDQ96IW2 340 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 RBM41Q96IZ5 413 aaKnown RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 PNKPQ96T60 521 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 SLC2A11Q9BYW1 496 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 TBC1D17Q9HA65 648 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 ABCB8Q9NUT2 735 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 ZNF212Q9UDV6 495 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 GGA2Q9UJY4 613 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 ZKSCAN5Q9Y2L8 839 aa11.79□□□□□ -0.52
KARS-207ENST00000566560 MUC22E2RYF6 1773 aaPredicted RBP11.79□□□□□ -0.52
KARS-207ENST00000566560 TRIM24O15164 1050 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 KAT7O95251 611 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 ALADP13716 330 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 ERCC2P18074 760 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 CD72P21854 359 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 KDELR1P24390 212 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 CD70P32970 193 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 CSKP41240 450 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 HCAR3P49019 387 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 OXCT1P55809 520 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 RWDD2BP57060 319 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 MESP2Q0VG99 397 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 GRSF1Q12849 480 aaKnown RBP eCLIP11.78□□□□□ -0.52
KARS-207ENST00000566560 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 ZNF569Q5MCW4 686 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 VSIG1Q86XK7 387 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 AHI1Q8N157 1196 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.78□□□□□ -0.52
KARS-207ENST00000566560 EXD1Q8NHP7 514 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 WFIKKN2Q8TEU8 576 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 ALG3Q92685 438 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 FAF2Q96CS3 445 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 HES6Q96HZ4 224 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 MUC3BQ9H195 1237 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 RETREG1Q9H6L5 497 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 KCND1Q9NSA2 647 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
KARS-207ENST00000566560 KIAA1522Q9P206 1035 aaPredicted RBP11.78□□□□□ -0.52
KARS-207ENST00000566560 DNAI1Q9UI46 699 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms