RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 LINC00476Q8WZB0 136 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 SAAL1Q96ER3 474 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 PERPQ96FX8 193 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 NPLQ9BXD5 320 aaPredicted RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 HDHD5Q9BXW7 423 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 WDR11Q9BZH6 1224 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 HAUS2Q9NVX0 235 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 ASIC5Q9NY37 505 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 LYVE1Q9Y5Y7 322 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 COL4A3Q01955 1670 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 PER2O15055 1255 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 CCNDBP1O95273 360 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 CHRM4P08173 479 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 C1SP09871 688 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 RFPL3SP0C7P2 107 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 AKR1B1P15121 316 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 PORP16435 677 aaPredicted RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 ENGP17813 658 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 SLC8A1P32418 973 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 RPL7AP62424 266 aaKnown RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 TDGQ13569 410 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 AARS2Q5JTZ9 985 aaKnown RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 Q6ZNX1 250 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 MRGPREQ86SM8 312 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 GPR78Q96P69 363 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 GATA5Q9BWX5 397 aaPredicted RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 KRTAP3-1Q9BYR8 98 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 TTYH1Q9H313 450 aaPredicted RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 EPHX3Q9H6B9 360 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 EIF2B3Q9NR50 452 aaKnown RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 SEPT11Q9NVA2 429 aaKnown RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 MPP6Q9NZW5 540 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 CCNL1Q9UK58 526 aaPredicted RBP2.8□□□□□ -1.96
CHD9-209ENST00000564255 DTX4Q9Y2E6 619 aa2.8□□□□□ -1.96
CHD9-209ENST00000564255 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 SEC14L2O76054 403 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ADRB2P07550 413 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SLC3A2P08195 630 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 ELFN1P0C7U0 828 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 IL11P20809 199 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ICAM3P32942 547 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 CYP2C18P33260 490 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ACTN2P35609 894 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 WDR5P61964 334 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 SHC2P98077 582 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 EFNB1P98172 346 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 GXYLT1Q4G148 440 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SLC9B1Q4ZJI4 515 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 USP39Q53GS9 565 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 KLHL24Q6TFL4 600 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 C17orf99Q6UX52 265 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 PEG10Q86TG7 708 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 NKAIN3Q8N8D7 197 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SETD9Q8NE22 299 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 C2CD4CQ8TF44 421 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 TFAP2BQ92481 460 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 KCNJ9Q92806 393 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 FAM120BQ96EK7 910 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 P2RY11Q96G91 374 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 MPHOSPH8Q99549 860 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SYBUQ9NX95 663 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 A0A0G2JLL6 359 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 TTC34A8MYJ7 566 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 B4DLN1 442 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 MCIDASD6RGH6 385 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 TAF4O00268 1085 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 DSCR3O14972 297 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 PGM3O95394 542 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 TUBB4AP04350 444 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ADH4P08319 380 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 NR2F1P10589 423 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 HOXB9P17482 250 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 FPR3P25089 353 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 NDUFS1P28331 727 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 GRIA3P42263 894 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 CLK3P49761 638 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 RARSP54136 660 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 EEFSECP57772 596 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 DCTN2Q13561 401 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 WTAPQ15007 396 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SLC18A3Q16572 532 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 FAM133BQ5BKY9 247 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 AADACL2Q6P093 401 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 MDGA2Q7Z553 956 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 TMEM200AQ86VY9 491 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 PLD5Q8N7P1 536 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 MAFAQ8NHW3 353 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 FAM110DQ8TAY7 271 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 NOC3LQ8WTT2 800 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 UBE2Q2Q8WVN8 375 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 TBC1D5Q92609 795 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 HAS1Q92839 578 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 KIF1BPQ96EK5 621 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 COQ10AQ96MF6 247 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 MMS19Q96T76 1030 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ADGRE3Q9BY15 652 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 ADD3Q9UEY8 706 aaKnown RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 SLCO3A1Q9UIG8 710 aa2.79□□□□□ -1.96
CHD9-209ENST00000564255 SIRT4Q9Y6E7 314 aaPredicted RBP2.79□□□□□ -1.96
CHD9-209ENST00000564255 C17orf113A0A1B0GUU1 675 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms