RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 CD48P09326 243 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TNNT1P13805 278 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 GJC1P36383 396 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 CCINQ13939 588 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 DMC1Q14565 340 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 FBXO43Q4G163 708 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
CDH11-204ENST00000562712 FSTL4Q6MZW2 842 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 SYNPOQ8N3V7 929 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 PRSS33Q8NF86 280 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 EXD1Q8NHP7 514 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 WFDC5Q8TCV5 224 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 CSPG4P5Q96PW8 444 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 FEM1AQ9BSK4 669 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 ABCB8Q9NUT2 735 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
CDH11-204ENST00000562712 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 STK25O00506 426 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 NCAM2O15394 837 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 FTCDO95954 541 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 CHRNB1P11230 501 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 PABPC1P11940 636 aaKnown RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 ERCC2P18074 760 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 CD70P32970 193 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 RWDD2BP57060 319 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 COPS2P61201 443 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 LMAN2Q12907 356 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 FZD5Q13467 585 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 EIF4HQ15056 248 aaKnown RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 E2F5Q15329 346 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 TAZQ16635 292 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 DGKKQ5KSL6 1271 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 ADIPOR2Q86V24 386 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 UMODL1-AS1Q8N2C9 162 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 KRT35Q92764 455 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 ALG14Q96F25 216 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 LTB4R2Q9NPC1 389 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 KLHL11Q9NVR0 708 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 ELOVL2Q9NXB9 296 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 DNAI1Q9UI46 699 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 SIT1Q9Y3P8 196 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 MTF2Q9Y483 593 aaPredicted RBP13.09□□□□□ -0.31
CDH11-204ENST00000562712 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
CDH11-204ENST00000562712 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 DCLK1O15075 740 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 KIF5CO60282 957 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 EGFP01133 1207 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 KRT1P04264 644 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 RHOCP08134 193 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 AMPD1P23109 780 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 TARSP26639 723 aaKnown RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 MZF1P28698 734 aaPredicted RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 ETFBP38117 255 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 CLCN5P51795 746 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 NDST2P52849 883 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 GNA12Q03113 381 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 KDSRQ06136 332 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 RNF219Q5W0B1 726 aaPredicted RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 TMEM215Q68D42 235 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 CWF19L1Q69YN2 538 aaKnown RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 PJA1Q8NG27 643 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 OR52K2Q8NGK3 314 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 PCDH19Q8TAB3 1148 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 EZH1Q92800 747 aaPredicted RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 CLDN23Q96B33 292 aa13.08□□□□□ -0.32
CDH11-204ENST00000562712 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
CDH11-204ENST00000562712 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms