RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PCDH19Q8TAB3 1148 aa23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 FAM3CQ92520 227 aa23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 RUNDC3BQ96NL0 473 aa23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 C8orf33Q9H7E9 229 aaPredicted RBP23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 OR12D3Q9UGF7 316 aa23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 SNX10Q9Y5X0 201 aa23.1■■□□□ 1.29
SYNGR3-202ENST00000562045 ANTXRLA6NF34 631 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 APOC4-APOC2K7ER74 178 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 APOL1O14791 398 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 PI15O43692 258 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 PAGE1O75459 146 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 APOC2P02655 101 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 ZFXP17010 805 aaPredicted RBP23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 PIK3R6Q5UE93 754 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 SLC9A4Q6AI14 798 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 SFTPA1Q8IWL2 248 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 CPXM2Q8N436 756 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 ATP6V0D2Q8N8Y2 350 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 CCDC26Q8TAB7 109 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 C1orf54Q8WWF1 131 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 PRICKLE1Q96MT3 831 aaPredicted RBP23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 BBS2Q9BXC9 721 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 FRMD8P1Q9BZ68 369 aaPredicted RBP23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 CLEC4EQ9ULY5 219 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 NDRG2Q9UN36 371 aaKnown RBP23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 ATG2BQ96BY7 2078 aa23.09■■□□□ 1.29
SYNGR3-202ENST00000562045 LATS1O95835 1130 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 ADH1CP00326 375 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 TYRP14679 529 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 GLULP15104 373 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 TARSP26639 723 aaKnown RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 CHKAP35790 457 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 HCAR3P49019 387 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 SLC11A2P49281 568 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 GALK1P51570 392 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 MLLT6P55198 1093 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 TPI1P60174 286 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 ACBD5Q5T8D3 534 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 RAP1GAP2Q684P5 730 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 CCDC137Q6PK04 289 aaKnown RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 RFX8Q6ZV50 586 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 MAATS1Q7Z4T9 603 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 PQLC3Q8N755 202 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 EZH1Q92800 747 aaPredicted RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 AZIN2Q96A70 460 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 PBXIP1Q96AQ6 731 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 BTN2A3PQ96KV6 586 aa23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 R3HDM2Q9Y2K5 976 aaKnown RBP23.08■■□□□ 1.29
SYNGR3-202ENST00000562045 KANSL1LA0AUZ9 987 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 HOXC11O43248 304 aaPredicted RBP23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 RHOXF2BP0C7M4 288 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 TGM2P21980 687 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 HTR7P34969 479 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 NR1H3Q13133 447 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 FZD5Q13467 585 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 MS4A13Q5J8X5 152 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 ZNF852Q6ZMS4 543 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 ETFBKMTQ8IXQ9 262 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 GPR161Q8N6U8 529 aaKnown RBP23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 ATG4AQ8WYN0 398 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 C1orf74Q96LT6 269 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 PRMT1Q99873 361 aaKnown RBP23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 RHOXF2Q9BQY4 288 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 LRRC1Q9BTT6 524 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 MFSD1Q9H3U5 465 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 LTB4R2Q9NPC1 389 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 MARK1Q9P0L2 795 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 AMACRQ9UHK6 382 aa23.08■■□□□ 1.28
SYNGR3-202ENST00000562045 WDFY4Q6ZS81 3184 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM72CH0Y354 149 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 STK25O00506 426 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 DAPK3O43293 454 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 PENKP01210 267 aaPredicted RBP23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 COILP38432 576 aaPredicted RBP23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 GAD2Q05329 585 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 DHX34Q14147 1143 aaKnown RBP23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 NAA30Q147X3 362 aaPredicted RBP23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 UBXN2BQ14CS0 331 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 ELF2Q15723 593 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 ARTNQ5T4W7 220 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM72AQ5TYM5 149 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM72DQ6L9T8 149 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM72BQ86X60 149 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 HAUS1Q96CS2 278 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 SIK2Q9H0K1 926 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 ARHGEF4Q9NR80 690 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 PCYOX1Q9UHG3 505 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 HS3ST4Q9Y661 456 aa23.07■■□□□ 1.28
SYNGR3-202ENST00000562045 ZDBF2Q9HCK1 2354 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 NRG1Q02297 640 aaPredicted RBP23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 FSTL4Q6MZW2 842 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 DRICH1Q6PGQ1 229 aaPredicted RBP23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 C14orf80Q86SX3 495 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 CCDC105Q8IYK2 499 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 CFAP52Q8N1V2 620 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 PHTF2Q8N3S3 785 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 PLD5Q8N7P1 536 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 ACTL9Q8TC94 416 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 P3H4Q92791 437 aa23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 SHDQ96IW2 340 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms