RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 RELTQ969Z4 430 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TLCD1Q96CP7 247 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 FCRL2Q96LA5 508 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CEP295NLQ96MC4 621 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 FRMD6Q96NE9 622 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 HAPLN3Q96S86 360 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TKTL2Q9H0I9 626 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TSPYL1Q9H0U9 437 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 FBXO44Q9H4M3 255 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF395Q9H8N7 513 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 IL23AQ9NPF7 189 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 EURLQ9NYK6 297 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CLIC5Q9NZA1 410 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 COX16Q9P0S2 106 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 HSFX1Q9UBD0 423 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 HEY1Q9Y5J3 304 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 RAD54BQ9Y620 910 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CDY1Q9Y6F8 540 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CLUHO75153 1309 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CDC14CA4D256 554 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 SLC38A8A6NNN8 435 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 WASH4PA8MWX3 477 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 NDC80O14777 642 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PPP1R12AO14974 1030 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 CHADO15335 359 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 EIF3HO15372 352 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 KCNN4O15554 427 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 MSI1O43347 362 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 EFCAB14O75071 495 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PAGE1O75459 146 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 BAIAP3O94812 1187 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 RTN3O95197 1032 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 METTL18O95568 372 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 CPB1P15086 417 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 HMGA1P17096 107 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 RPL17P18621 184 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 YWHAQP27348 245 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 GCAP28676 217 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 HTR7P34969 479 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 MAGEA3P43357 314 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 MAGEA4P43358 317 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ALDH7A1P49419 539 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 GPX6P59796 221 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 GALNT2Q10471 571 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 TAF10Q12962 218 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 FASTKD3Q14CZ7 662 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 TERF2Q15554 542 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 KYNUQ16719 465 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 HSP90B2PQ58FF3 399 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 C9orf50Q5SZB4 431 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PIK3R6Q5UE93 754 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 SNX30Q5VWJ9 437 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 DENND2CQ68D51 928 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 FAM117BQ6P1L5 589 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 DENND5BQ6ZUT9 1274 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 OTOP2Q7RTS6 562 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ARHGAP12Q8IWW6 846 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 KLHDC8BQ8IXV7 354 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ARHGAP18Q8N392 663 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 VWA5B2Q8N398 1253 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 SH2D3CQ8N5H7 860 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 CCDC110Q8TBZ0 833 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 GPR152Q8TDT2 470 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ATP6V1G3Q96LB4 118 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF558Q96NG5 402 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 RBM15Q96T37 977 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 LGMNQ99538 433 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 GORASP1Q9BQQ3 440 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PRDM12Q9H4Q4 367 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PLAC1Q9HBJ0 212 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 DNAJC17Q9NVM6 304 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 TMEM51Q9NW97 253 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PSD3Q9NYI0 1048 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 VPS18Q9P253 973 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 PAK5Q9P286 719 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF212Q9UDV6 495 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 OR12D3Q9UGF7 316 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 AFF4Q9UHB7 1163 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 XPO7Q9UIA9 1087 aaKnown RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 ADAM21Q9UKJ8 722 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 NUDT5Q9UKK9 219 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 TLR6Q9Y2C9 796 aa6.72□□□□□ -1.33
CAPN3-210ENST00000561817 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-210ENST00000561817 DOCK4Q8N1I0 1966 aa6.71□□□□□ -1.33
CAPN3-210ENST00000561817 NUP205Q92621 2012 aa6.71□□□□□ -1.33
CAPN3-210ENST00000561817 IGLV3-10A0A075B6K4 115 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 A0A0A0MRY4 1105 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6CA6NDK9 693 aa6.71□□□□□ -1.34
CAPN3-210ENST00000561817 LILRA1O75019 489 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms