RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SMAD3P84022 425 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ZNF844Q08AG5 666 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 HSP90B2PQ58FF3 399 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ZNF697Q5TEC3 545 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 PID1Q7Z2X4 250 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ANKMY2Q8IV38 441 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ZBED8Q8IZ13 594 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 FERMT1Q9BQL6 677 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 TMEM248Q9NWD8 314 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 KLHL8Q9P2G9 620 aaPredicted RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 AGO1Q9UL18 857 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 NUP205Q92621 2012 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 F5H5T6 163 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 CHADO15335 359 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 CLASP2O75122 1294 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 PSMB4P28070 264 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 AFMIDQ63HM1 303 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 CAPN12Q6ZSI9 719 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 TRMT10CQ7L0Y3 403 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 LZTR1Q8N653 840 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 USP33Q8TEY7 942 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 MRPS31Q92665 395 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ZNF419Q96HQ0 510 aaPredicted RBP20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 PBX4Q9BYU1 374 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 ASAH2Q9NR71 780 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 PCDHA11Q9Y5I1 949 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 CPQQ9Y646 472 aa20.92■□□□□ 0.94
SNRPA1-205ENST00000558036 DRGXA6NNA5 263 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 WASH4PA8MWX3 477 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 E7EVH7 732 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 MAFKO60675 156 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 OPHN1O60890 802 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 CKMP06732 381 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 SGSHP51688 502 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ERVK-21P61565 698 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 RPS24P62847 133 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 CBX1P83916 185 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 CENPUQ71F23 418 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ADGRD2Q7Z7M1 963 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ADAMTS19Q8TE59 1207 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 GBF1Q92538 1859 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ARL8AQ96BM9 186 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 HMCESQ96FZ2 354 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 PRICKLE1Q96MT3 831 aaPredicted RBP20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 SH3GL2Q99962 352 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ZNF212Q9UDV6 495 aa20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 ZFP37Q9Y6Q3 630 aaPredicted RBP20.91■□□□□ 0.94
SNRPA1-205ENST00000558036 H3BNC9 293 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 NDC80O14777 642 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 ZBTB24O43167 697 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 TSPAN3O60637 253 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 TTC4O95801 387 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 JCHAINP01591 159 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 GRIA1P42261 906 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 ARL4CP56559 192 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 IFFO1Q0D2I5 559 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 SPDYCQ5MJ68 293 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 TCEAL4Q96EI5 215 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 WDR83Q9BRX9 315 aaKnown RBP20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 FOXP3Q9BZS1 431 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 BRD8Q9H0E9 1235 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 CENPHQ9H3R5 247 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 ANAPC1Q9H1A4 1944 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 POLR3GO15318 223 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 OLFM2O95897 454 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 BBS9Q3SYG4 887 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 UMODL1-AS1Q8N2C9 162 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 ZSCAN18Q8TBC5 510 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 ARNTL2Q8WYA1 636 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 SERPINB12Q96P63 405 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 SMG9Q9H0W8 520 aaKnown RBP20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 MED4Q9NPJ6 270 aa20.9■□□□□ 0.94
SNRPA1-205ENST00000558036 NUDT17P0C025 328 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 OR1E1P30953 314 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 SEMA5AQ13591 1074 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 LRIG3Q6UXM1 1119 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 GOLGA6L1Q8N7Z2 621 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 PDCD7Q8N8D1 485 aaKnown RBP20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 NKX2-4Q9H2Z4 354 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 TTLL3Q9Y4R7 772 aa20.89■□□□□ 0.94
SNRPA1-205ENST00000558036 SMIM23A6NLE4 172 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 RNF40O75150 1001 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 CD68P34810 354 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 OLIG2Q13516 323 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 TEX44Q53QW1 395 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 TTMPQ5BVD1 217 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 KCTD16Q68DU8 428 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 C4orf22Q6V702 233 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 ZNF354CQ86Y25 554 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 RELL1Q8IUW5 271 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 PDIK1LQ8N165 341 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 AGGF1Q8N302 714 aaeCLIP20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 CNTD1Q8N815 330 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 EXOC4Q96A65 974 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 GORASP1Q9BQQ3 440 aa20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 PIH1D1Q9NWS0 290 aaKnown RBP20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 DNMT3BQ9UBC3 853 aaKnown RBP20.89■□□□□ 0.93
SNRPA1-205ENST00000558036 HCFC2Q9Y5Z7 792 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms