RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 RHOBTB3O94955 611 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ADH1BP00325 375 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 SRPRAP08240 638 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 SETSIPP0DME0 302 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ZSCAN22P10073 491 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 VAV1P15498 845 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ACP1P24666 158 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 DRD3P35462 400 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 STK19P49842 368 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ECT2LQ008S8 904 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CUL2Q13617 745 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ELAVL3Q14576 367 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 RNF219Q5W0B1 726 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 PMF1Q6P1K2 205 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CCDC117Q8IWD4 279 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 APCDD1Q8J025 514 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CACTIN-AS1Q8N1I8 211 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 SCML4Q8N228 414 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 OXR1Q8N573 874 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 TFAP2BQ92481 460 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 AZIN2Q96A70 460 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ARHGAP20Q9P2F6 1191 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 CA5BQ9Y2D0 317 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 DOCK9Q9BZ29 2069 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 HECTD1Q9ULT8 2610 aa9.34□□□□□ -0.91
HNRNPC-227ENST00000556897 ITIH6Q6UXX5 1313 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 STX10O60499 249 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 MOCS3O95396 460 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 MOCS2O96007 188 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 MT-CO3P00414 261 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 F13A1P00488 732 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 LTFP02788 710 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 MPOP05164 745 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 VDRP11473 427 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 PCBP4P57723 403 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 DAB2P98082 770 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 E2F1Q01094 437 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 LRMPQ12912 555 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 ZNF211Q13398 564 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 STAT4Q14765 748 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 POM121L1PQ3SYA9 428 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 ZCWPW2Q504Y3 356 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 DCAF6Q58WW2 860 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 DCAF17Q5H9S7 520 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 ARHGAP40Q5TG30 622 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 LCLAT1Q6UWP7 414 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 PRPF39Q86UA1 669 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 IQCHQ86VS3 1027 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 SLC25A45Q8N413 288 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 GUF1Q8N442 669 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 ZNF248Q8NDW4 579 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 IRGQQ8WZA9 623 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 CCDC47Q96A33 483 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 CPNE5Q9HCH3 593 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 CYTH4Q9UIA0 394 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 XPO7Q9UIA9 1087 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 CFAP45Q9UL16 551 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 TLR6Q9Y2C9 796 aa9.33□□□□□ -0.92
HNRNPC-227ENST00000556897 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 M0QYV0 167 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 FFAR2O15552 330 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 PLRG1O43660 514 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 MAGEC1O60732 1142 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 FYNP06241 537 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 EPB41P11171 864 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 CMA1P23946 247 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 TMPRSS3P57727 454 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 YWHAEP62258 255 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 RHDQ02161 417 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 DPYDQ12882 1025 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 OVGP1Q12889 678 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 PKP1Q13835 747 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 TCERG1LQ5VWI1 586 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 TMEM270Q6UE05 265 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 SMYD4Q8IYR2 804 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 LGI2Q8N0V4 545 aa9.32□□□□□ -0.92
HNRNPC-227ENST00000556897 UBR7Q8N806 425 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms