RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 SIN3BO75182 1162 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 PAGE1O75459 146 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 CER1O95813 267 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 ADH1BP00325 375 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 CYP1A1P04798 512 aaPredicted RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 PDGFRAP16234 1089 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 C5AR1P21730 350 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 CD27P26842 260 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 MAOBP27338 520 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 RDXP35241 583 aaKnown RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 SOX5P35711 763 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 STAT1P42224 750 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 JAM2P57087 298 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 NOMO3P69849 1222 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 CDR2Q01850 454 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 DEUP1Q05D60 604 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 GRIK2Q13002 908 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 ELAVL3Q14576 367 aaKnown RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 CST6Q15828 149 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 CCDC183Q5T5S1 534 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 CXorf57Q6NSI4 855 aaKnown RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 LRRC31Q6UY01 552 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 BNIPLQ7Z465 357 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 DSG4Q86SJ6 1040 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 SETD3Q86TU7 594 aaPredicted RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 IGSF8Q969P0 613 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 ALG14Q96F25 216 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 FEM1AQ9BSK4 669 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 TKTL2Q9H0I9 626 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 MIR1-1HGQ9H1L0 117 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 PIGVQ9NUD9 493 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 FBXL12Q9NXK8 326 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 EIF2B4Q9UI10 523 aaKnown RBP12.98□□□□□ -0.33
SNX6-207ENST00000556303 SLCO3A1Q9UIG8 710 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 VANGL2Q9ULK5 521 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 SIK3Q9Y2K2 1263 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 PCDHGB2Q9Y5G2 931 aa12.98□□□□□ -0.33
SNX6-207ENST00000556303 IGLV3-10A0A075B6K4 115 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 CXorf51AA0A1B0GTR3 108 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 LRRC72A6NJI9 287 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 DRGXA6NNA5 263 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 LGALS16A8MUM7 142 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 TTC34A8MYJ7 566 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ALOX15BO15296 676 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ATP9BO43861 1147 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ENDOD1O94919 500 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 TRIM16O95361 564 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ADCY5O95622 1261 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 MMEP08473 750 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 GOT1P17174 413 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 MMP8P22894 467 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 MZF1P28698 734 aaPredicted RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 GRIA4P48058 902 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 SULT1E1P49888 294 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 POLR2FP61218 127 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 KRT83P78385 493 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 TEAD4Q15561 434 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 OTUD1Q5VV17 481 aaPredicted RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ZNF783Q6ZMS7 281 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 FAM124AQ86V42 546 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 ZCCHC9Q8N567 271 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 FRS2Q8WU20 508 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 CNTNAP3BQ96NU0 1288 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ERGIC2Q96RQ1 377 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 FAM129BQ96TA1 746 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 CNTNAP3Q9BZ76 1288 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 C6orf106Q9H6K1 298 aaPredicted RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 FAM207AQ9NSI2 230 aaPredicted RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 SLC25A13Q9UJS0 675 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
SNX6-207ENST00000556303 OR51B4Q9Y5P0 310 aa12.97□□□□□ -0.33
SNX6-207ENST00000556303 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.33
SNX6-207ENST00000556303 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 GIPC1O14908 333 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 MID1O15344 667 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 SLC7A4O43246 635 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 DFNA5O60443 496 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 GFPT2O94808 682 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 CCDC172P0C7W6 258 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 CD59P13987 128 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 ZNF18P17022 549 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
SNX6-207ENST00000556303 SLC8A1P32418 973 aa12.96□□□□□ -0.33
SNX6-207ENST00000556303 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms