RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 EMCNQ9ULC0 261 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 MFHAS1Q9Y4C4 1052 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 HES2Q9Y543 173 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 NME7Q9Y5B8 376 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 WASF2Q9Y6W5 498 aa7.17□□□□□ -1.26
TDP1-213ENST00000555880 ZNF638Q14966 1978 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 SMIM28A0A1B0GU29 152 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 MEI4A8MW99 385 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 TMEM114B3SHH9 223 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 M0QYT0 321 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 AP3B1O00203 1094 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PIRO00625 290 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 TIMM44O43615 452 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ITM2AO43736 263 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 STRNO43815 780 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 SMIM24O75264 130 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 HSPA4LO95757 839 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 MPOP05164 745 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 LINGO3P0C6S8 592 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ERVK-10P10266 1014 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 DARSP14868 501 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 NPR3P17342 541 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 NCF2P19878 526 aaPredicted RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 AKAP5P24588 427 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 LMO2P25791 158 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PEX19P40855 299 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 IDH3AP50213 366 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 NME3Q13232 169 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PAFAH1B3Q15102 231 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 TMCO4Q5TGY1 634 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PDPK2PQ6A1A2 396 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ITPRIPL1Q6GPH6 555 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 MAMDC4Q6UXC1 1216 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ALKAL1Q6UXT8 129 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 IZUMO2Q6UXV1 221 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PID1Q7Z2X4 250 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 STRA8Q7Z7C7 330 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 DPP9Q86TI2 863 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PIGZQ86VD9 579 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ZNF567Q8N184 647 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 B3GALNT2Q8NCR0 500 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ARNTL2Q8WYA1 636 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 JADE3Q92613 823 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 WNT8BQ93098 351 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ZNF669Q96BR6 464 aaPredicted RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 CLPTM1LQ96KA5 538 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 TSC22D3Q99576 134 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 TTC1Q99614 292 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 OSMRQ99650 979 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 RBBP8Q99708 897 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 HNRNPABQ99729 332 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 MED10Q9BTT4 135 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 DUSP16Q9BY84 665 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 CEP41Q9BYV8 373 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 BRD8Q9H0E9 1235 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PRDM12Q9H4Q4 367 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 SNX15Q9NRS6 342 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 SPATS2LQ9NUQ6 558 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 PDP2Q9P2J9 529 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 VANGL2Q9ULK5 521 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PIN4Q9Y237 131 aaKnown RBP7.16□□□□□ -1.26
TDP1-213ENST00000555880 NR2E3Q9Y5X4 410 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 PSAT1Q9Y617 370 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 ZNF236Q9UL36 1845 aa7.16□□□□□ -1.26
TDP1-213ENST00000555880 MAGEB16A2A368 324 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 HCRTO43612 131 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 GFRA3O60609 400 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 FBXO21O94952 628 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 AP2A1O95782 977 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 GSRP00390 522 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 APOA4P06727 396 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 CYP2C9P11712 490 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 HOXD8P13378 290 aaPredicted RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 KCNE1P15382 129 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 ALOX15P16050 662 aaPredicted RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 WARSP23381 471 aaKnown RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 SP100P23497 879 aaPredicted RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 CPOXP36551 454 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 MLH1P40692 756 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 HADHAP40939 763 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 HARS2P49590 506 aaKnown RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 LIMK2P53671 638 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 CACNA2D1P54289 1103 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 TPI1P60174 286 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 TUBB3Q13509 450 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 ITGA9Q13797 1035 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 DPYSQ14117 519 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 FRG1Q14331 258 aaKnown RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 ARL13BQ3SXY8 428 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 DUSP28Q4G0W2 176 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 RABGAP1LQ5R372 815 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 MAP3K21Q5TCX8 1036 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 ADGRG6Q86SQ4 1221 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 METTL3Q86U44 580 aaKnown RBP7.15□□□□□ -1.26
TDP1-213ENST00000555880 TOP6BLQ8N6T0 577 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 OR52K1Q8NGK4 314 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 UCMAQ8WVF2 138 aa7.15□□□□□ -1.26
TDP1-213ENST00000555880 KCTD13Q8WZ19 329 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms