RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GALNT15Q8N3T1 639 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 GSTCDQ8NEC7 633 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 GPRC5AQ8NFJ5 357 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 SLC7A14Q8TBB6 771 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 FAM149B1Q96BN6 582 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 GBP5Q96PP8 586 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 EIF2AQ9BY44 585 aaKnown RBP16.54■□□□□ 0.24
TUBB3-209ENST00000555609 PAPOLBQ9NRJ5 636 aaKnown RBP16.54■□□□□ 0.24
TUBB3-209ENST00000555609 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 KLHL8Q9P2G9 620 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-209ENST00000555609 BCAP29Q9UHQ4 241 aa16.54■□□□□ 0.24
TUBB3-209ENST00000555609 PRPF19Q9UMS4 504 aaKnown RBP16.54■□□□□ 0.24
TUBB3-209ENST00000555609 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SMIM28A0A1B0GU29 152 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SLCO1B7G3V0H7 640 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 CASQ2O14958 399 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SNUPNO95149 360 aaKnown RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 HSPA4LO95757 839 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 DARSP14868 501 aaKnown RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 NPR3P17342 541 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 LMO2P25791 158 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 PTPN3P26045 913 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 MLH1P40692 756 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 PEX19P40855 299 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 PPIDQ08752 370 aaKnown RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 DUSP28Q4G0W2 176 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 FAM182AQ5T1J6 154 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 OTUD1Q5VV17 481 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 STRA8Q7Z7C7 330 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 CNDP1Q96KN2 507 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 FCRL3Q96P31 734 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SERPINI1Q99574 410 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 KLHL4Q9C0H6 718 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 LRRC4Q9HBW1 653 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 SEPT10Q9P0V9 454 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 MCM3APO60318 1980 aa16.53■□□□□ 0.24
TUBB3-209ENST00000555609 EIF4E1BA6NMX2 242 aaKnown RBP16.52■□□□□ 0.24
TUBB3-209ENST00000555609 M0QYT0 321 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 MMP3P08254 477 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 THRAP10827 490 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 COX4I1P13073 169 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ITGAXP20702 1163 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ADRA1BP35368 520 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ZNF33AQ06730 810 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ADIGQ0VDE8 80 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 CCNIQ14094 377 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 PPM1JQ5JR12 505 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-209ENST00000555609 KCTD11Q693B1 232 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 SDCCAG8Q86SQ7 713 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-209ENST00000555609 TMEM126BQ8IUX1 230 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ZNF669Q96BR6 464 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-209ENST00000555609 BTBD9Q96Q07 612 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 LPIN3Q9BQK8 851 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 IL22Q9GZX6 179 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 ILKAPQ9H0C8 392 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-209ENST00000555609 GBA3Q9H227 469 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 VPS28Q9UK41 221 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
TUBB3-209ENST00000555609 A0A096LPK6 155 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 ZCWPW2A0A1B0GU75 182 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 MEI4A8MW99 385 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 G3V2L1 256 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 COL6A2P12110 1019 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 NCF2P19878 526 aaPredicted RBP16.52■□□□□ 0.23
TUBB3-209ENST00000555609 CYP2B6P20813 491 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 GLDCP23378 1020 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 MTTPP55157 894 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SH3BGRP55822 239 aaPredicted RBP16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SATB1Q01826 763 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 KLF10Q13118 480 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SEMA3BQ13214 749 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 BSPRYQ5W0U4 402 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 IQSEC1Q6DN90 963 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 FSTL4Q6MZW2 842 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SIX6OS1Q8N1H7 587 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 URGCPQ8TCY9 931 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 OPTNQ96CV9 577 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 HDAC11Q96DB2 347 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 MCMBPQ9BTE3 642 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 CXCL16Q9H2A7 254 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 COG4Q9H9E3 785 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 NMRAL1Q9HBL8 299 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 GPBP1L1Q9HC44 474 aaPredicted RBP16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 VTI1BQ9UEU0 232 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 POMPQ9Y244 141 aa16.52■□□□□ 0.23
TUBB3-209ENST00000555609 SPTLC1O15269 473 aa16.51■□□□□ 0.23
TUBB3-209ENST00000555609 CREB3O43889 395 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms