RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 CSKP41240 450 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 CSRP3P50461 194 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 RAD23BP54727 409 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ADPRHP54922 357 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ERVPABLB-1P60509 514 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 CUL2Q13617 745 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 SGO2Q562F6 1265 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 KIAA1614Q5VZ46 1190 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ARHGAP17Q68EM7 881 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 RFWD3Q6PCD5 774 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 KANSL1Q7Z3B3 1105 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 PRPF39Q86UA1 669 aaKnown RBP13.71□□□□□ -0.21
TUBB3-207ENST00000554927 LURAP1LQ8IV03 231 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 MFSD2AQ8NA29 543 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 SLC4A11Q8NBS3 891 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 EDEM1Q92611 657 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-207ENST00000554927 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 DPH1Q9BZG8 443 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 TRIM4Q9C037 500 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 FAM117AQ9C073 453 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 POLR1BQ9H9Y6 1135 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 THSD1Q9NS62 852 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
TUBB3-207ENST00000554927 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 CEP83Q9Y592 693 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.22
TUBB3-207ENST00000554927 TP53BP1Q12888 1972 aaPredicted RBP13.71□□□□□ -0.22
TUBB3-207ENST00000554927 TYW5A2RUC4 315 aaKnown RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 TTC34A8MYJ7 566 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 FFAR2O15552 330 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 MSI1O43347 362 aaKnown RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CSO75390 466 aaKnown RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 LATS1O95835 1130 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 ADH1BP00325 375 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 IL1BP01584 269 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 ASLP04424 464 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 LSSP48449 732 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 PPP2CBP62714 309 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 PPP2CAP67775 309 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 LRMPQ12912 555 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 STAT4Q14765 748 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 C9orf64Q5T6V5 341 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 AADATQ8N5Z0 425 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
TUBB3-207ENST00000554927 ABCG4Q9H172 646 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 OSBPL2Q9H1P3 480 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 STOML2Q9UJZ1 356 aa13.7□□□□□ -0.22
TUBB3-207ENST00000554927 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 TARSL2A2RTX5 802 aaKnown RBP13.69□□□□□ -0.22
TUBB3-207ENST00000554927 TRIM49BA6NDI0 452 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 OPA1O60313 960 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
TUBB3-207ENST00000554927 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
TUBB3-207ENST00000554927 GNA14O95837 355 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 VDRP11473 427 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 C5AR1P21730 350 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 RBMS1P29558 406 aaKnown RBP13.69□□□□□ -0.22
TUBB3-207ENST00000554927 SLC11A2P49281 568 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 PMS1P54277 932 aaKnown RBP13.69□□□□□ -0.22
TUBB3-207ENST00000554927 NFATC3Q12968 1075 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 GOLGA7BQ2TAP0 167 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 RAB41Q5JT25 222 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 MPP7Q5T2T1 576 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 PIK3R6Q5UE93 754 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 STK40Q8N2I9 435 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 TTC17Q96AE7 1141 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 MYO19Q96H55 970 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 NT5C1BQ96P26 610 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
TUBB3-207ENST00000554927 EDDM13A0A1B0GTR0 161 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
TUBB3-207ENST00000554927 P4HA2O15460 535 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 CTSOP43234 321 aaPredicted RBP13.68□□□□□ -0.22
TUBB3-207ENST00000554927 FMO5P49326 533 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 BST2Q10589 180 aaKnown RBP13.68□□□□□ -0.22
TUBB3-207ENST00000554927 OVGP1Q12889 678 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 CDH18Q13634 790 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 POM121L1PQ3SYA9 428 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 C3orf38Q5JPI3 329 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 C6orf132Q5T0Z8 1188 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 CDCP2Q5VXM1 449 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 BSPRYQ5W0U4 402 aa13.68□□□□□ -0.22
TUBB3-207ENST00000554927 PM20D1Q6GTS8 502 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms