RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 EDARQ9UNE0 448 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 DNM3Q9UQ16 869 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 TNFSF13BQ9Y275 285 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MORC2Q9Y6X9 1032 aaPredicted RBP4.53□□□□□ -1.68
VTI1B-203ENST00000554636 DOCK6Q96HP0 2047 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 ZDBF2Q9HCK1 2354 aa4.53□□□□□ -1.68
VTI1B-203ENST00000554636 MYO10Q9HD67 2058 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CASTOR2A6NHX0 329 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 SLC16A4O15374 487 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 TEX28O15482 410 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 DCXO43602 365 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ALDH1A2O94788 518 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 LY86O95711 162 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ALDH2P05091 517 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 URODP06132 367 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 LPLP06858 475 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CNPP09543 421 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 SRGAP2BP0DMP2 458 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 SYT1P21579 422 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 LONP1P36776 959 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CASRP41180 1078 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 OR1G1P47890 313 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 MAN2A2P49641 1150 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CLCN4P51793 760 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 PHC1P78364 1004 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ABHD18Q0P651 414 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 STRN3Q13033 797 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 GIT2Q14161 759 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 FHL2Q14192 279 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 KARSQ15046 597 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ZRSR1Q15695 479 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 XKR4Q5GH76 650 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 GLRA4Q5JXX5 417 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ATF7IP2Q5U623 682 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 FAM173BQ6P4H8 233 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CD300LGQ6UXG3 332 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 USP49Q70CQ1 688 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 TAS1R1Q7RTX1 841 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 GPBP1Q86WP2 473 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 GPR65Q8IYL9 337 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 TMEM161BQ8NDZ6 487 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 OR5M3Q8NGP4 307 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 RAD54LQ92698 747 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 SNX27Q96L92 541 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 FAM193BQ96PV7 902 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 PPP1R10Q96QC0 940 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 RPS6KC1Q96S38 1066 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ACO2Q99798 780 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ADPGKQ9BRR6 497 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 TIPINQ9BVW5 301 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 APOL5Q9BWW9 433 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 PHF7Q9BWX1 381 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 C1QTNF1Q9BXJ1 281 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CCSER1Q9C0I3 900 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 NT5C3AQ9H0P0 336 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 PCED1AQ9H1Q7 454 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 POMKQ9H5K3 350 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 MMRN2Q9H8L6 949 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 SFXN1Q9H9B4 322 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 C17orf75Q9HAS0 396 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 KMT5AQ9NQR1 393 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CEP72Q9P209 647 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 USP36Q9P275 1121 aaKnown RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 STK39Q9UEW8 545 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 MUTYHQ9UIF7 546 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 FBXO2Q9UK22 296 aaPredicted RBP4.52□□□□□ -1.69
VTI1B-203ENST00000554636 GDAQ9Y2T3 454 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 CLIC4Q9Y696 253 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 MUC6Q6W4X9 2439 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 ANK1P16157 1881 aa4.52□□□□□ -1.69
VTI1B-203ENST00000554636 TRIOO75962 3097 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CCDC169A6NNP5 214 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 C2CD4DB7Z1M9 353 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 TMEM189-UBE2V1I3L0A0 370 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 K7ERI5 159 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 STX6O43752 255 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 NARSO43776 548 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 PRAMEF4O60810 478 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 PIGRP01833 764 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 THP07101 528 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 WEE2P0C1S8 567 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MCF2P10911 925 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 KCNE1P15382 129 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 HK1P19367 917 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 PDCP20941 246 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MARCKSP29966 332 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CA8P35219 290 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 GLUD2P49448 558 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 ZNF131P52739 623 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MANFP55145 182 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 MCL1Q07820 350 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 SPIDRQ14159 915 aa4.51□□□□□ -1.69
VTI1B-203ENST00000554636 TRIM25Q14258 630 aaKnown RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 HERC4Q5GLZ8 1057 aaPredicted RBP4.51□□□□□ -1.69
VTI1B-203ENST00000554636 CT83Q5H943 113 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms