RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CAB39LQ9H9S4 337 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 ERAP1Q9NZ08 941 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 PHF24Q9UPV7 400 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 FIS1Q9Y3D6 152 aa12.65□□□□□ -0.38
HDAC7-230ENST00000552960 H3BRB1 525 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 XPO1O14980 1071 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 VILLO15195 856 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 DNAJA2O60884 412 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CRTAMO95727 393 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 GPD2P43304 727 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CCR10P46092 362 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 HDAC4P56524 1084 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 BEX3Q00994 111 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CAP1Q01518 475 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 STILQ15468 1287 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 DLG2Q15700 870 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PABPC1LQ4VXU2 614 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 FSCBQ5H9T9 825 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PGM2L1Q6PCE3 622 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 AMIGO2Q86SJ2 522 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 METTL25Q8N6Q8 603 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MAF1Q9H063 256 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 SEMA6AQ9H2E6 1030 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 ZNF711Q9Y462 761 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 H3BNX3 289 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 TMCC1O94876 653 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PIGRP01833 764 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 XRCC1P18887 633 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PHKA2P46019 1235 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 SLC10A2Q12908 348 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 IER5Q5VY09 327 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MCRS1Q96EZ8 462 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 LIN28AQ9H9Z2 209 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 HEMK1Q9Y5R4 338 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MAGEB3O15480 346 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 SMIM18P0DKX4 95 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MX2P20592 715 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 THOP1P52888 689 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 MYLK3Q32MK0 819 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CCDC14Q49A88 953 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 KBTBD6Q86V97 674 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PLD6Q8N2A8 252 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 FRMD8Q9BZ67 464 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 FAM49AQ9H0Q0 323 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
HDAC7-230ENST00000552960 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
HDAC7-230ENST00000552960 H3BSA7 217 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 STRNO43815 780 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 FGFR3P22607 806 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 PCSK6P29122 969 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 NDST1P52848 882 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 FKBP1BP68106 108 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 MBTD1Q05BQ5 628 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 BOLA3Q53S33 107 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 TMEM198Q66K66 360 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 CYP4V2Q6ZWL3 525 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-230ENST00000552960 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 C1orf127Q8N9H9 656 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 FAM167AQ96KS9 214 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 PRICKLE1Q96MT3 831 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-230ENST00000552960 TCF7L2Q9NQB0 619 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 TMCO1Q9UM00 188 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 PDE4DIPQ5VU43 2346 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 GPR25O00155 361 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 HBP1O60381 514 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 CSPG5O95196 566 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 GLRBP48167 497 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 MTTPP55157 894 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 GRM2Q14416 872 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 KIZQ2M2Z5 673 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 ATF7IP2Q5U623 682 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 CDKL3Q8IVW4 592 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-230ENST00000552960 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 SIX4Q9UIU6 781 aa12.63□□□□□ -0.39
HDAC7-230ENST00000552960 CHRNGP07510 517 aa12.62□□□□□ -0.39
HDAC7-230ENST00000552960 MMP3P08254 477 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms