RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ACSL4O60488 711 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 THEGLP0DJG4 465 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 MAT2AP31153 395 aaKnown RBP15.82■□□□□ 0.12
CACNB3-220ENST00000551716 SGSHP51688 502 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 ZSCAN23Q3MJ62 389 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 ZNF394Q53GI3 561 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 FAM174AQ8TBP5 190 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 EDEM1Q92611 657 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 PTPRN2Q92932 1015 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 SPAG5Q96R06 1193 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
CACNB3-220ENST00000551716 UCKL1Q9NWZ5 548 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 ANKMY1Q9P2S6 941 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 SLCO3A1Q9UIG8 710 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 INTS6Q9UL03 887 aaKnown RBP15.82■□□□□ 0.12
CACNB3-220ENST00000551716 ATXN7L1Q9ULK2 861 aaPredicted RBP15.82■□□□□ 0.12
CACNB3-220ENST00000551716 COL12A1Q99715 3063 aa15.82■□□□□ 0.12
CACNB3-220ENST00000551716 XPO1O14980 1071 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 TCEA3O75764 348 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 PIAS2O75928 621 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 GP1BBP13224 206 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 KRT10P13645 584 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 DRD3P35462 400 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 SULT2A1Q06520 285 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 CCDC15Q0P6D6 951 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 CLN3Q13286 438 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 FAM133BQ5BKY9 247 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 PITRM1Q5JRX3 1037 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 NEK5Q6P3R8 708 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 RBM44Q6ZP01 1051 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 USP53Q70EK8 1073 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 CLEC14AQ86T13 490 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 DCP2Q8IU60 420 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 SIX6OS1Q8N1H7 587 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 CARNMT1Q8N4J0 409 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 WDR36Q8NI36 951 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 WDR48Q8TAF3 677 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 IFI44Q8TCB0 444 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 SRRTQ9BXP5 876 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 APOBEC3GQ9HC16 384 aaKnown RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 PREBQ9HCU5 417 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 UNC79Q9P2D8 2635 aa15.81■□□□□ 0.12
CACNB3-220ENST00000551716 USP9XQ93008 2570 aaPredicted RBP15.81■□□□□ 0.12
CACNB3-220ENST00000551716 GOLGA6L7A0A1B0GV03 622 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 PDXKO00764 312 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 MAPK13O15264 365 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 RTN2O75298 545 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 IGLV3-27P01718 113 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 SLC6A4P31645 630 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 HNRNPKP61978 463 aaKnown RBP eCLIP15.8■□□□□ 0.12
CACNB3-220ENST00000551716 SERINC3Q13530 473 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 MSANTD2Q6P1R3 559 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 BHLHA9Q7RTU4 235 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 SCML4Q8N228 414 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 TMEM145Q8NBT3 493 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
CACNB3-220ENST00000551716 DHX58Q96C10 678 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 SGF29Q96ES7 293 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 ATXN7L3BQ96GX2 97 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 CNGB3Q9NQW8 809 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 IGSF5Q9NSI5 407 aa15.8■□□□□ 0.12
CACNB3-220ENST00000551716 YJEFN3A6XGL0 299 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 E7ENQ6 273 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 K7ESM1 405 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 MSI1O43347 362 aaKnown RBP15.79■□□□□ 0.12
CACNB3-220ENST00000551716 TNFSF15O95150 251 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 NR3C1P04150 777 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 GIMD1P0DJR0 217 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 AKT2P31751 481 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 CTSOP43234 321 aaPredicted RBP15.79■□□□□ 0.12
CACNB3-220ENST00000551716 VAMP7P51809 220 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 TBX4P57082 545 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 ENPEPQ07075 957 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 SLC12A1Q13621 1099 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 UBAP2LQ14157 1087 aaKnown RBP15.79■□□□□ 0.12
CACNB3-220ENST00000551716 LINC00303Q3SY05 128 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 ZCCHC8Q6NZY4 707 aaKnown RBP15.79■□□□□ 0.12
CACNB3-220ENST00000551716 SLC4A11Q8NBS3 891 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 OR8D1Q8WZ84 308 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 PRR11Q96HE9 360 aaPredicted RBP15.79■□□□□ 0.12
CACNB3-220ENST00000551716 PPP1R9BQ96SB3 815 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 HESX1Q9UBX0 185 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 ENTPD2Q9Y5L3 495 aa15.79■□□□□ 0.12
CACNB3-220ENST00000551716 TP53BP1Q12888 1972 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 TEX15Q9BXT5 2789 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 C1QTNF3-AMACRE9PGA6 284 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 LUC7L3O95232 432 aaKnown RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 ITGA2BP08514 1039 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 ITGB6P18564 788 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 TGM2P21980 687 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 RAD23BP54727 409 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 RPS24P62847 133 aaKnown RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 ADIGQ0VDE8 80 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 BST2Q10589 180 aaKnown RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 ZNF177Q13360 481 aaPredicted RBP15.78■□□□□ 0.12
CACNB3-220ENST00000551716 POM121L1PQ3SYA9 428 aa15.78■□□□□ 0.12
CACNB3-220ENST00000551716 FSCBQ5H9T9 825 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms