RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MGAT5BQ3V5L5 792 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CCDC58Q4VC31 144 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 AARS2Q5JTZ9 985 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NKAPLQ5M9Q1 402 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 TMTC4Q5T4D3 741 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SEL1L2Q5TEA6 688 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CIAPIN1Q6FI81 312 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF530Q6P9A1 599 aaPredicted RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 DBX2Q6ZNG2 339 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 RNF207Q6ZRF8 634 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 PRR23CQ6ZRP0 262 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 RFX8Q6ZV50 586 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NEK10Q6ZWH5 1172 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 MIER3Q7Z3K6 550 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 KRT28Q7Z3Y7 464 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ADAT2Q7Z6V5 191 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 GLRX5Q86SX6 157 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CCDC25Q86WR0 208 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 TTC30AQ86WT1 665 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 LACC1Q8IV20 430 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CPNE9Q8IYJ1 553 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 C4orf33Q8N1A6 199 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC25A41Q8N5S1 370 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NATD1Q8N6N6 113 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 RNF169Q8NCN4 708 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SUN5Q8TC36 379 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 TCP10LQ8TDR4 215 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 GRK7Q8WTQ7 553 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 DCAKDQ8WVC6 231 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 TFB1MQ8WVM0 346 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CELF1Q92879 486 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ATP2A3Q93084 1043 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC35C1Q96A29 364 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 VMP1Q96GC9 406 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 FEM1CQ96JP0 617 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CEP295NLQ96MC4 621 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 PWWP2AQ96N64 755 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SNX18Q96RF0 628 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 AIFM2Q9BRQ8 373 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 HERPUD2Q9BSE4 406 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ISCA1Q9BUE6 129 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NUP85Q9BW27 656 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 OSBPL11Q9BXB4 747 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NPLQ9BXD5 320 aaPredicted RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 FGFBP2Q9BYJ0 223 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ANKRD60Q9BZ19 345 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 FRMD8Q9BZ67 464 aaPredicted RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 NUF2Q9BZD4 464 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 WWP1Q9H0M0 922 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 THAP2Q9H0W7 228 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SMARCAD1Q9H4L7 1026 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 RMND5AQ9H871 391 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 GPN2Q9H9Y4 310 aaPredicted RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 FAM105AQ9NUU6 356 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 DNAJC17Q9NVM6 304 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 SLC17A7Q9P2U7 560 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 STK39Q9UEW8 545 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 TBK1Q9UHD2 729 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 IPO11Q9UI26 975 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 AGO2Q9UKV8 859 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 PRPF19Q9UMS4 504 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 APOBEC2Q9Y235 224 aaKnown RBP5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 MYRFQ9Y2G1 1151 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 RABGAP1Q9Y3P9 1069 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF804BA4D1E1 1349 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 CLUHO75153 1309 aa5.43□□□□□ -1.54
LSM3P2-201ENST00000551246 DIP2BQ9P265 1576 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 ANKRD36CQ5JPF3 1778 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 ARFGEF2Q9Y6D5 1785 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 GOLGA8QA0A0J9YX86 632 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 EXOC1LA0A1B0GW35 172 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 DENND3A2RUS2 1198 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 FAM221AA4D161 298 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 GOLGA8OA6NCC3 632 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 E9PMD0 336 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 GOLGA8NF8WBI6 632 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 TMX2-CTNND1H3BSU7 103 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 GOLGA8RI6L899 631 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 TXNDC9O14530 226 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 ZNF195O14628 629 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 DNALI1O14645 258 aaPredicted RBP5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 ENTPD3O75355 529 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 MYO1DO94832 1006 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 CPNE6O95741 557 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 NTRK1P04629 796 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 SERPINB2P05120 415 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 LDHCP07864 332 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 UQCRFS1P1P0C7P4 283 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 GZMAP12544 262 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 POLR2CP19387 275 aaPredicted RBP5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 PROZP22891 400 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 PKLRP30613 574 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 BTDP43251 543 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 PSMD8P48556 350 aa5.42□□□□□ -1.54
LSM3P2-201ENST00000551246 PCYT1AP49585 367 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms